Difference between revisions of "Tiso gene 11192"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** bh0493_...")
(Created page with "Category:Gene == Gene Tiso_gene_11192 == * right end position: ** 2437 * transcription direction: ** POSITIVE * left end position: ** 71 * centisome position: ** 0.8926326...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN] ==
+
== Gene Tiso_gene_11192 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 2437
−
* common name:
+
* transcription direction:
−
** ORF
+
** POSITIVE
−
** bh0493_protein
+
* left end position:
−
* ec number:
+
** 71
−
** [http://enzyme.expasy.org/EC/5.3.1.12 EC-5.3.1.12]
+
* centisome position:
 +
** 0.89263266   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.6.3.50-RXN]]
−
** 1 [[CPD-15633]][c] '''<=>''' 1 [[D-TAGATURONATE]][c]
+
** Source: [[orthology-esiliculosus]]
−
* With common name(s):
+
* Reaction: [[ATPASE-RXN]]
−
** 1 aldehydo-D-galacturonate[c] '''<=>''' 1 D-tagaturonate[c]
+
** Source: [[orthology-athaliana]]
−
 
+
* Reaction: [[ATPSYN-RXN]]
−
== Genes associated with this reaction  ==
+
** Source: [[annotation-experimental_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: ec-number
−
* [[Tiso_gene_19097]]
+
== Pathways associated ==
−
** IN-SILICO_ANNOTATION
+
* [[PWY-7219]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_8329]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7248]], pectin degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248]
+
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
−
* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=2437}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27702 27702]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=71}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01983 R01983]
+
{{#set: centisome position=0.89263266    }}
−
* UNIPROT:
+
{{#set: reaction associated=3.6.3.50-RXN|ATPASE-RXN|ATPSYN-RXN}}
−
** [http://www.uniprot.org/uniprot/P0A8G3 P0A8G3]
+
{{#set: pathway associated=PWY-7219}}
−
** [http://www.uniprot.org/uniprot/Q9CF53 Q9CF53]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=bh0493_protein}}
+
−
{{#set: ec number=EC-5.3.1.12}}
+
−
{{#set: gene associated=Tiso_gene_19097|Tiso_gene_8329}}
+
−
{{#set: in pathway=PWY-7248|GALACTUROCAT-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:51, 21 March 2018

Gene Tiso_gene_11192

  • right end position:
    • 2437
  • transcription direction:
    • POSITIVE
  • left end position:
    • 71
  • centisome position:
    • 0.89263266
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11192&oldid=44226"