Difference between revisions of "Tiso gene 450"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNTRANSAM-RXN ACETYLORNTRANSAM-RXN] == * direction: ** REVERSIBLE * common name: ** acetylor...")
(Created page with "Category:Gene == Gene Tiso_gene_450 == * right end position: ** 29312 * transcription direction: ** POSITIVE * left end position: ** 27086 * centisome position: ** 81.0642...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNTRANSAM-RXN ACETYLORNTRANSAM-RXN] ==
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== Gene Tiso_gene_450 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 29312
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* common name:
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* transcription direction:
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** acetylornithine_aminotransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.6.1.11 EC-2.6.1.11]
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** 27086
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* centisome position:
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** 81.064255   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
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** 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[CPD-469]][c] '''+''' 1 [[GLT]][c]
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* With common name(s):
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** 1 N-acetyl-L-ornithine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 N-acetyl-L-glutamate 5-semialdehyde[c] '''+''' 1 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11231]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=29312}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18049 18049]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=27086}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02283 R02283]
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{{#set: centisome position=81.064255    }}
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* UNIPROT:
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{{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P18335 P18335]
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** [http://www.uniprot.org/uniprot/Q9PIR7 Q9PIR7]
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** [http://www.uniprot.org/uniprot/Q9JTX9 Q9JTX9]
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** [http://www.uniprot.org/uniprot/Q9CHD3 Q9CHD3]
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** [http://www.uniprot.org/uniprot/P30900 P30900]
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** [http://www.uniprot.org/uniprot/P18544 P18544]
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** [http://www.uniprot.org/uniprot/O74548 O74548]
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** [http://www.uniprot.org/uniprot/O14433 O14433]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=acetylornithine_aminotransferase}}
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{{#set: ec number=EC-2.6.1.11}}
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{{#set: gene associated=Tiso_gene_11231}}
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{{#set: in pathway=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:51, 21 March 2018

Gene Tiso_gene_450

  • right end position:
    • 29312
  • transcription direction:
    • POSITIVE
  • left end position:
    • 27086
  • centisome position:
    • 81.064255
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_450&oldid=44249"