Difference between revisions of "Tiso gene 12104"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4303 RXN-4303] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Gene == Gene Tiso_gene_12104 == * right end position: ** 3222 * transcription direction: ** NEGATIVE * left end position: ** 22 * centisome position: ** 0.3015764...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4303 RXN-4303] ==
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== Gene Tiso_gene_12104 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3222
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.112 EC-2.5.1.112]
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** NEGATIVE
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* left end position:
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** 22
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* centisome position:
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** 0.30157644   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PHOSGLYPHOS-RXN]]
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** 1 [[CPD-4211]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-4201]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 dimethylallyl diphosphate[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 N6-(Δ2-isopentenyl)-adenosine 5'-triphosphate[c]
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== Pathways associated ==
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* [[PWY-1042]]
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== Genes associated with this reaction  ==
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* [[PWY66-399]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLUCONEO-PWY]]
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* [[Tiso_gene_3274]]
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* [[SUCSYN-PWY]]
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** [[pantograph]]-[[athaliana]]
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* [[PWY-6901]]
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** [[pantograph]]-[[esiliculosus]]
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* [[P124-PWY]]
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== Pathways  ==
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* [[GLYCOLYSIS]]
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* [[PWY-2681]], trans-zeatin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681]
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* [[PWY-6886]]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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* [[CALVIN-PWY]]
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== Reconstruction information  ==
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* [[ANAGLYCOLYSIS-PWY]]
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* Category: [[orthology]]
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* [[P122-PWY]]
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** Source: [[orthology-athaliana]]
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* [[P185-PWY]]
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*** Tool: [[pantograph]]
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* [[PWY-5484]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7003]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=3222}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08051 R08051]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=22}}
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{{#set: ec number=EC-2.5.1.112}}
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{{#set: centisome position=0.30157644    }}
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{{#set: gene associated=Tiso_gene_3274}}
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{{#set: reaction associated=PHOSGLYPHOS-RXN}}
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{{#set: in pathway=PWY-2681}}
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{{#set: pathway associated=PWY-1042|PWY66-399|GLUCONEO-PWY|SUCSYN-PWY|PWY-6901|P124-PWY|GLYCOLYSIS|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|P122-PWY|P185-PWY|PWY-5484|PWY-7003}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:52, 21 March 2018

Gene Tiso_gene_12104

  • right end position:
    • 3222
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 22
  • centisome position:
    • 0.30157644
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12104&oldid=44255"