Difference between revisions of "RXN-12245"

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(Created page with "Category:Gene == Gene Tiso_gene_8763 == * left end position: ** 4630 * transcription direction: ** POSITIVE * right end position: ** 4767 * centisome position: ** 38.95339...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12245 RXN-12245] == * direction: ** LEFT-TO-RIGHT * common name: ** phytoene synthase * Synonym...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_8763 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12245 RXN-12245] ==
* left end position:
+
* direction:
** 4630
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
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** phytoene synthase
* right end position:
+
** 4767
+
* centisome position:
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** 38.953392   
+
 
* Synonym(s):
 
* Synonym(s):
 +
** prephytoene-diphosphate synthase
 +
** phytoene synthetase
 +
** PSase
 +
** geranylgeranyl-diphosphate geranylgeranyltransferase
  
== Reactions associated ==
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== Reaction Formula ==
* [[ATPASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-464]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PHYTOENE]][c]
***ec-number
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* With common name(s):
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** 1 prephytoene diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 all-trans-phytoene[c]
** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
* [[RXN-12195]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* Gene: [[Tiso_gene_15914]]
***ec-number
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** Source: [[orthology-synechocystis]]
* [[RXN-12196]]
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== Pathways ==
** in-silico_annotation
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== Reconstruction information  ==
***ec-number
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* Category: [[orthology]]
* [[RXN0-5462]]
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** Source: [[orthology-synechocystis]]
** in-silico_annotation
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*** Tool: [[pantograph]]
***ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
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== External links  ==
 
== External links  ==
{{#set: left end position=4630}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=phytoene synthase}}
{{#set: right end position=4767}}
+
{{#set: common name=prephytoene-diphosphate synthase|phytoene synthetase|PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
{{#set: centisome position=38.953392    }}
+
{{#set: gene associated=Tiso_gene_15914}}
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
{{#set: in pathway=}}
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:53, 21 March 2018

Reaction RXN-12245

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phytoene synthase
  • Synonym(s):
    • prephytoene-diphosphate synthase
    • phytoene synthetase
    • PSase
    • geranylgeranyl-diphosphate geranylgeranyltransferase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 prephytoene diphosphate[c] => 1 diphosphate[c] + 1 all-trans-phytoene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links