Difference between revisions of "PMPOXI-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_17059 == * left end position: ** 452 * transcription direction: ** NEGATIVE * right end position: ** 3560 * centisome position: ** 11.45754...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine_5_-phosphate...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17059 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] ==
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* left end position:
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* direction:
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** 452
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
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* right end position:
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* ec number:
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** 3560
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** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
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* centisome position:
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** 11.4575405   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PYRROLINECARBREDUCT-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[AMMONIUM]][c]
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***ec-number
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* With common name(s):
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* [[RXN66-546]]
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** 1 pyridoxamine 5'-phosphate[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ammonium[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6344]]
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* Gene: [[Tiso_gene_1471]]
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* [[ARG-PRO-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PROSYN-PWY]]
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*** Assignment: EC-NUMBER
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* [[PWY-4981]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-3341]]
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== Pathways ==
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=452}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15817 15817]
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{{#set: right end position=3560}}
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* LIGAND-RXN:
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{{#set: centisome position=11.4575405    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
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{{#set: reaction associated=PYRROLINECARBREDUCT-RXN|RXN66-546}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6344|ARG-PRO-PWY|PROSYN-PWY|PWY-4981|PWY-3341}}
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** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
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** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
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** [http://www.uniprot.org/uniprot/P44909 P44909]
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** [http://www.uniprot.org/uniprot/P38075 P38075]
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** [http://www.uniprot.org/uniprot/P74211 P74211]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyridoxamine_5_-phosphate_oxidase-related_fmn-binding}}
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{{#set: ec number=EC-1.4.3.5}}
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{{#set: gene associated=Tiso_gene_1471}}
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{{#set: in pathway=PWY-7204|PLPSAL-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction PMPOXI-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 8 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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