Difference between revisions of "RXN-5641"

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(Created page with "Category:Gene == Gene Tiso_gene_6106 == * left end position: ** 185 * transcription direction: ** NEGATIVE * right end position: ** 2128 * centisome position: ** 1.287942...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5641 RXN-5641] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/4....")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_6106 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5641 RXN-5641] ==
* left end position:
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* direction:
** 185
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/4.1.1 EC-4.1.1]
* right end position:
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** 2128
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* centisome position:
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** 1.287942   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[PNKIN-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[SER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETHANOL-AMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
***automated-name-match
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* With common name(s):
** [[pantograph]]-[[athaliana]]
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** 1 L-serine[c] '''+''' 1 H+[c] '''=>''' 1 ethanolamine[c] '''+''' 1 CO2[c]
** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Genes associated with this reaction  ==
* [[PYRAMKIN-RXN]]
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== Pathways  ==
** in-silico_annotation
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* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
***automated-name-match
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** '''7''' reactions found over '''16''' reactions in the full pathway
** [[pantograph]]-[[athaliana]]
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* [[PWY4FS-6]], phosphatidylethanolamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-6 PWY4FS-6]
** [[pantograph]]-[[esiliculosus]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
** [[pantograph]]-[[creinhardtii]]
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* [[PWY-3385]], choline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3385 PWY-3385]
* [[PYRIDOXKIN-RXN]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
** in-silico_annotation
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== Reconstruction information  ==
***automated-name-match
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* Category: [[annotation]]
** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-in-silico_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** Tool: [[pathwaytools]]
** [[pantograph]]-[[creinhardtii]]
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== Pathways associated ==
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* [[PWY-7204]]
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* [[PWY-7282]]
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* [[PLPSAL-PWY]]
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== External links  ==
 
== External links  ==
{{#set: left end position=185}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-4.1.1}}
{{#set: right end position=2128}}
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{{#set: in pathway=PWY-7782|PWY4FS-6|PWY-3385}}
{{#set: centisome position=1.287942    }}
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{{#set: reconstruction category=annotation}}
{{#set: reaction associated=PNKIN-RXN|PYRAMKIN-RXN|PYRIDOXKIN-RXN}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: pathway associated=PWY-7204|PWY-7282|PLPSAL-PWY}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction RXN-5641

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7782, plasmalogen biosynthesis: PWY-7782
    • 7 reactions found over 16 reactions in the full pathway
  • PWY4FS-6, phosphatidylethanolamine biosynthesis II: PWY4FS-6
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-3385, choline biosynthesis I: PWY-3385
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links