Difference between revisions of "CPD-14018"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14018 CPD-14018] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)C...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14018 CPD-14018] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCC=CCC=CCC=CCC=CCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
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** uracil_phosphoribosyltransferase
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** icosapentaenoyl-CoA
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.4.2.9 EC-2.4.2.9]
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** InChIKey=JWZLRYCDDXHXDL-LCMHIRPZSA-J
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* molecular weight:
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** 1047.943   
 
* Synonym(s):
 
* Synonym(s):
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** (5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
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** (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-CoA
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** (5Z,8Z,11Z,14Z,17Z)-eicosa-5,8,11,14,17-pentaenoyl-CoA
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** (5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyl-CoA
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** eicosapentaenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13442]]
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** 1 [[URACIL]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-13430]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 uracil[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''=>''' 1 UMP[c] '''+''' 1 diphosphate[c]
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* [[RXN-12978]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10462]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_14867]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7183]], pyrimidine nucleobases salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7183 PWY-7183]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13017 13017]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71581014 71581014]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R00966 R00966]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73862 73862]
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* UNIPROT:
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/P0A8F0 P0A8F0]
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{{#set: common name=icosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P39765 P39765]
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{{#set: inchi key=InChIKey=JWZLRYCDDXHXDL-LCMHIRPZSA-J}}
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** [http://www.uniprot.org/uniprot/Q9CEC9 Q9CEC9]
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{{#set: molecular weight=1047.943    }}
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** [http://www.uniprot.org/uniprot/P47276 P47276]
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{{#set: common name=(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA|(5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-CoA|(5Z,8Z,11Z,14Z,17Z)-eicosa-5,8,11,14,17-pentaenoyl-CoA|(5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyl-CoA|eicosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/O27186 O27186]
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{{#set: consumed by=RXN-13442|RXN-13430}}
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** [http://www.uniprot.org/uniprot/P43857 P43857]
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{{#set: produced by=RXN-12978}}
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** [http://www.uniprot.org/uniprot/O67914 O67914]
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** [http://www.uniprot.org/uniprot/P44722 P44722]
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** [http://www.uniprot.org/uniprot/Q9PN13 Q9PN13]
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** [http://www.uniprot.org/uniprot/P65941 P65941]
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** [http://www.uniprot.org/uniprot/P39149 P39149]
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** [http://www.uniprot.org/uniprot/P18562 P18562]
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** [http://www.uniprot.org/uniprot/P41007 P41007]
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** [http://www.uniprot.org/uniprot/P72753 P72753]
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** [http://www.uniprot.org/uniprot/Q55758 Q55758]
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** [http://www.uniprot.org/uniprot/P93394 P93394]
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** [http://www.uniprot.org/uniprot/O65583 O65583]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=uracil_phosphoribosyltransferase}}
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{{#set: ec number=EC-2.4.2.9}}
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{{#set: gene associated=Tiso_gene_10462|Tiso_gene_14867}}
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{{#set: in pathway=PWY-7183}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:54, 21 March 2018

Metabolite CPD-14018

  • smiles:
    • CCC=CCC=CCC=CCC=CCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • icosapentaenoyl-CoA
  • inchi key:
    • InChIKey=JWZLRYCDDXHXDL-LCMHIRPZSA-J
  • molecular weight:
    • 1047.943
  • Synonym(s):
    • (5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
    • (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-CoA
    • (5Z,8Z,11Z,14Z,17Z)-eicosa-5,8,11,14,17-pentaenoyl-CoA
    • (5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyl-CoA
    • eicosapentaenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCC=CCC=CCC=CCC=CCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-14018&oldid=44539"