Difference between revisions of "Tiso gene 19350"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1438 RXN1G-1438] == * direction: ** LEFT-TO-RIGHT * common name: ** trehalose-phosphatase * e...")
(Created page with "Category:Gene == Gene Tiso_gene_19350 == * right end position: ** 2388 * transcription direction: ** POSITIVE * left end position: ** 639 * centisome position: ** 26.69172...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1438 RXN1G-1438] ==
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== Gene Tiso_gene_19350 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2388
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* common name:
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* transcription direction:
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** trehalose-phosphatase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
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** 639
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* centisome position:
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** 26.691729   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[CPD1G-773]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD1G-1353]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 6-O-cis-keto-mycolyl-trehalose 6-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 trehalose-cis-keto-mono-mycolate[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_14220]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-12196]]
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* [[Tiso_gene_10840]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN0-5462]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2388}}
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{{#set: common name=trehalose-phosphatase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-3.1.3.12}}
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{{#set: left end position=639}}
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{{#set: gene associated=Tiso_gene_14220|Tiso_gene_10840}}
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{{#set: centisome position=26.691729    }}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:54, 21 March 2018

Gene Tiso_gene_19350

  • right end position:
    • 2388
  • transcription direction:
    • POSITIVE
  • left end position:
    • 639
  • centisome position:
    • 26.691729
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19350&oldid=44545"