Difference between revisions of "RXN-8654"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_12960 == * left end position: ** 657 * transcription direction: ** NEGATIVE * right end position: ** 4643 * centisome position: ** 9.951529...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** lipoate-protein_ligase_a |
| − | * | + | ** lipoate-protein_ligase |
| − | ** | + | |
| − | * | + | |
| − | * | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | + | ** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''=>''' 1 [[LIPOYL-AMP]][c] '''+''' 1 [[PPI]][c] | |
| − | + | * With common name(s): | |
| − | + | ** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 (R)-lipoate[c] '''=>''' 1 lipoyl-adenylate[c] '''+''' 1 diphosphate[c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | * | + | * Gene: [[Tiso_gene_4493]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | + | *** Assignment: AUTOMATED-NAME-MATCH | |
| − | + | * Gene: [[Tiso_gene_4494]] | |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | ** in-silico_annotation | + | * Gene: [[Tiso_gene_17215]] |
| − | *** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | ** in-silico_annotation | + | * Gene: [[Tiso_gene_8713]] |
| − | *** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | ** in-silico_annotation | + | * Gene: [[Tiso_gene_17216]] |
| − | *** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | ** in-silico_annotation | + | == Pathways == |
| − | *** | + | * [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984] |
| − | * [[ | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | ** in-silico_annotation | + | * [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522] |
| − | *** | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | == Pathways | + | == Reconstruction information == |
| − | * [[ | + | * Category: [[annotation]] |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | + | *** Tool: [[pathwaytools]] | |
| − | * | + | |
| − | * [[ | + | |
| − | + | ||
| − | * [[ | + | |
| − | * [[ | + | |
| − | * [[ | + | |
== External links == | == External links == | ||
| − | + | * RHEA: | |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12913 12913] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: pathway | + | {{#set: common name=lipoate-protein_ligase_a}} |
| + | {{#set: common name=lipoate-protein_ligase}} | ||
| + | {{#set: gene associated=Tiso_gene_4493|Tiso_gene_4494|Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_17216}} | ||
| + | {{#set: in pathway=PWY-6984|PWY0-522}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:55, 21 March 2018
Contents
Reaction RXN-8654
- direction:
- LEFT-TO-RIGHT
- common name:
- lipoate-protein_ligase_a
- lipoate-protein_ligase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ATP[c] + 1 PROTON[c] + 1 LIPOIC-ACID[c] => 1 LIPOYL-AMP[c] + 1 PPI[c]
- With common name(s):
- 1 ATP[c] + 1 H+[c] + 1 (R)-lipoate[c] => 1 lipoyl-adenylate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_4493
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_4494
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_17215
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_8713
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_17216
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-6984, lipoate salvage II: PWY-6984
- 2 reactions found over 4 reactions in the full pathway
- PWY0-522, lipoate salvage I: PWY0-522
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
