Difference between revisions of "Tiso gene 18937"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] == * direction: ** REVERSIBLE * common name: ** pentafunctional_protein...")
(Created page with "Category:Gene == Gene Tiso_gene_18937 == * right end position: ** 2697 * transcription direction: ** POSITIVE * left end position: ** 2127 * centisome position: ** 78.7486...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] ==
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== Gene Tiso_gene_18937 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 2697
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* common name:
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* transcription direction:
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** pentafunctional_protein
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.5.1.19 EC-2.5.1.19]
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** 2127
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* centisome position:
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** 78.74861   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DAHPSYN-RXN]]
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** 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[SHIKIMATE-5P]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c]
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* With common name(s):
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** 1 phosphoenolpyruvate[c] '''+''' 1 shikimate 3-phosphate[c] '''<=>''' 1 phosphate[c] '''+''' 1 5-enolpyruvoyl-shikimate 3-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5753]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_5752]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6164]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2697}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21256 21256]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2127}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03460 R03460]
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{{#set: centisome position=78.74861    }}
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* UNIPROT:
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{{#set: reaction associated=DAHPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/P22299 P22299]
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{{#set: pathway associated=PWY-6164}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/P22487 P22487]
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** [http://www.uniprot.org/uniprot/P52312 P52312]
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** [http://www.uniprot.org/uniprot/Q9JTT3 Q9JTT3]
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** [http://www.uniprot.org/uniprot/Q03421 Q03421]
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** [http://www.uniprot.org/uniprot/P19786 P19786]
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** [http://www.uniprot.org/uniprot/P17688 P17688]
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** [http://www.uniprot.org/uniprot/P24497 P24497]
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** [http://www.uniprot.org/uniprot/P23981 P23981]
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** [http://www.uniprot.org/uniprot/P23281 P23281]
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** [http://www.uniprot.org/uniprot/Q04570 Q04570]
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** [http://www.uniprot.org/uniprot/P43905 P43905]
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** [http://www.uniprot.org/uniprot/Q59975 Q59975]
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** [http://www.uniprot.org/uniprot/P12421 P12421]
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** [http://www.uniprot.org/uniprot/P07637 P07637]
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** [http://www.uniprot.org/uniprot/P19688 P19688]
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** [http://www.uniprot.org/uniprot/P0A6D3 P0A6D3]
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** [http://www.uniprot.org/uniprot/P11043 P11043]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: ec number=EC-2.5.1.19}}
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{{#set: gene associated=Tiso_gene_5753|Tiso_gene_5752}}
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{{#set: in pathway=PWY-6163}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|manual-primary_network|annotation-in-silico_annotation|orthology-athaliana}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:55, 21 March 2018

Gene Tiso_gene_18937

  • right end position:
    • 2697
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2127
  • centisome position:
    • 78.74861
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18937&oldid=44695"