Difference between revisions of "RXN-9526"

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(Created page with "Category:Gene == Gene Tiso_gene_3260 == * left end position: ** 10034 * transcription direction: ** NEGATIVE * right end position: ** 11548 * centisome position: ** 58.520...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9526 RXN-9526] == * direction: ** LEFT-TO-RIGHT * common name: ** trans oct-2-enoyl-[acyl-carri...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3260 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9526 RXN-9526] ==
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* left end position:
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* direction:
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** 10034
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** trans oct-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)
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* right end position:
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** polyketide_synthase
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** 11548
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
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** 58.520935   
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** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
* Synonym(s):
 
* Synonym(s):
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** trans oct-2-enoyl-ACP reductase
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** trans oct-2-enoyl acyl-carrier-protein reductase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.2.1.25-RXN]]
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* With identifiers:
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** experimental_annotation
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** 1 [[2-Octenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
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***automated-name-match
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* With common name(s):
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* [[1.2.4.4-RXN]]
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** 1 a trans oct-2-enoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 an octanoyl-[acp][c] '''+''' 1 NADP+[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** experimental_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* Gene: [[Tiso_gene_10876]]
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* [[2.3.1.168-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** experimental_annotation
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*** Assignment: EC-NUMBER
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***automated-name-match
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* Gene: [[Tiso_gene_136]]
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* [[2KETO-3METHYLVALERATE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: EC-NUMBER
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* [[KETOISOCAPROATE-RXN]]
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* Gene: [[Tiso_gene_135]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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** experimental_annotation
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* Gene: [[Tiso_gene_500]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[METHYLVALERATE-RXN]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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* Gene: [[Tiso_gene_13394]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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** experimental_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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== Pathways  ==
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* [[RXN-7719]]
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** experimental_annotation
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** '''31''' reactions found over '''31''' reactions in the full pathway
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***automated-name-match
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== Reconstruction information  ==
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== Pathways associated ==
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* Category: [[manual]]
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* [[PWY-5046]]
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** Source: [[manual-primary_network]]
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* [[VALDEG-PWY]]
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* Category: [[annotation]]
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* [[PWY-5108]]
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** Source: [[annotation-in-silico_annotation]]
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* [[ILEUDEG-PWY]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=10034}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=trans oct-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)}}
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{{#set: right end position=11548}}
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{{#set: common name=polyketide_synthase}}
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{{#set: centisome position=58.520935    }}
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{{#set: ec number=EC-1.3.1.10}}
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{{#set: reaction associated=1.2.1.25-RXN|1.2.4.4-RXN|2.3.1.168-RXN|2KETO-3METHYLVALERATE-RXN|KETOISOCAPROATE-RXN|METHYLVALERATE-RXN|RXN-7719}}
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{{#set: ec number=EC-1.3.1.39}}
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{{#set: pathway associated=PWY-5046|VALDEG-PWY|PWY-5108|ILEUDEG-PWY}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: common name=trans oct-2-enoyl-ACP reductase|trans oct-2-enoyl acyl-carrier-protein reductase}}
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{{#set: gene associated=Tiso_gene_10876|Tiso_gene_136|Tiso_gene_135|Tiso_gene_500|Tiso_gene_13394}}
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{{#set: in pathway=PWY-5994}}
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{{#set: reconstruction category=manual|annotation}}
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{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:56, 21 March 2018

Reaction RXN-9526

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trans oct-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)
    • polyketide_synthase
  • ec number:
  • Synonym(s):
    • trans oct-2-enoyl-ACP reductase
    • trans oct-2-enoyl acyl-carrier-protein reductase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"trans oct-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)" cannot be used as a page name in this wiki.






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