Difference between revisions of "Tiso gene 4677"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMP-DEHYDROG-RXN IMP-DEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** inosine-5_-monop...")
(Created page with "Category:Gene == Gene Tiso_gene_4677 == * right end position: ** 9450 * transcription direction: ** POSITIVE * left end position: ** 3255 * centisome position: ** 22.36191...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMP-DEHYDROG-RXN IMP-DEHYDROG-RXN] ==
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== Gene Tiso_gene_4677 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 9450
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* common name:
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* transcription direction:
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** inosine-5_-monophosphate_dehydrogenase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.1.205 EC-1.1.1.205]
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** 3255
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* centisome position:
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** 22.361914   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PRPPSYN-RXN]]
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** 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 IMP[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 XMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6377]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
 
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** Source: [[orthology-creinhardtii]]
 
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*** Tool: [[pantograph]]
 
 
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Reaction: [[R5PDP]]
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* Category: [[manual]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[manual-primary_network]]
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* Reaction: [[RPDPK]]
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* Category: [[annotation]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[PWY0-662]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=9450}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11708 11708]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3255}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01130 R01130]
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{{#set: centisome position=22.361914    }}
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* UNIPROT:
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{{#set: reaction associated=PRPPSYN-RXN|R5PDP|RPDPK}}
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** [http://www.uniprot.org/uniprot/P12268 P12268]
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{{#set: pathway associated=PWY0-662}}
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** [http://www.uniprot.org/uniprot/P21620 P21620]
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** [http://www.uniprot.org/uniprot/P50098 P50098]
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** [http://www.uniprot.org/uniprot/P50097 P50097]
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** [http://www.uniprot.org/uniprot/O26245 O26245]
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** [http://www.uniprot.org/uniprot/Q9PAR5 Q9PAR5]
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** [http://www.uniprot.org/uniprot/P65172 P65172]
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** [http://www.uniprot.org/uniprot/Q9X168 Q9X168]
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** [http://www.uniprot.org/uniprot/Q9KTW3 Q9KTW3]
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** [http://www.uniprot.org/uniprot/Q9YBU2 Q9YBU2]
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** [http://www.uniprot.org/uniprot/Q9CIY6 Q9CIY6]
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** [http://www.uniprot.org/uniprot/P21879 P21879]
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** [http://www.uniprot.org/uniprot/P0ADG7 P0ADG7]
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** [http://www.uniprot.org/uniprot/P56088 P56088]
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** [http://www.uniprot.org/uniprot/P49058 P49058]
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** [http://www.uniprot.org/uniprot/O58045 O58045]
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** [http://www.uniprot.org/uniprot/Q9UY49 Q9UY49]
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** [http://www.uniprot.org/uniprot/Q9PKM2 Q9PKM2]
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** [http://www.uniprot.org/uniprot/Q9RT87 Q9RT87]
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** [http://www.uniprot.org/uniprot/Q9JUD0 Q9JUD0]
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** [http://www.uniprot.org/uniprot/Q59011 Q59011]
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** [http://www.uniprot.org/uniprot/Q9PNN3 Q9PNN3]
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** [http://www.uniprot.org/uniprot/P44334 P44334]
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** [http://www.uniprot.org/uniprot/O67820 O67820]
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** [http://www.uniprot.org/uniprot/P65167 P65167]
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** [http://www.uniprot.org/uniprot/Q9ZL14 Q9ZL14]
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** [http://www.uniprot.org/uniprot/Q9JZB5 Q9JZB5]
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** [http://www.uniprot.org/uniprot/Q9HXM5 Q9HXM5]
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** [http://www.uniprot.org/uniprot/P0C0H6 P0C0H6]
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** [http://www.uniprot.org/uniprot/P42851 P42851]
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** [http://www.uniprot.org/uniprot/P47996 P47996]
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** [http://www.uniprot.org/uniprot/Q9RHG9 Q9RHG9]
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** [http://www.uniprot.org/uniprot/P24547 P24547]
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** [http://www.uniprot.org/uniprot/Q9RHG1 Q9RHG1]
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** [http://www.uniprot.org/uniprot/P31002 P31002]
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** [http://www.uniprot.org/uniprot/Q07152 Q07152]
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** [http://www.uniprot.org/uniprot/P38697 P38697]
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** [http://www.uniprot.org/uniprot/P50094 P50094]
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** [http://www.uniprot.org/uniprot/P39567 P39567]
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** [http://www.uniprot.org/uniprot/P50095 P50095]
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** [http://www.uniprot.org/uniprot/Q49729 Q49729]
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** [http://www.uniprot.org/uniprot/O14344 O14344]
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** [http://www.uniprot.org/uniprot/O32912 O32912]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=inosine-5_-monophosphate_dehydrogenase}}
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{{#set: ec number=EC-1.1.1.205}}
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{{#set: gene associated=Tiso_gene_6377}}
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{{#set: in pathway=PWY-7221|PWY-5695|PWY-6596}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:56, 21 March 2018

Gene Tiso_gene_4677

  • right end position:
    • 9450
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3255
  • centisome position:
    • 22.361914
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4677&oldid=44706"