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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN] == | + | == Gene Tiso_gene_13099 == |
| − | * direction: | + | * right end position: |
| − | ** LEFT-TO-RIGHT | + | ** 6289 |
| − | * ec number: | + | * transcription direction: |
| − | ** [http://enzyme.expasy.org/EC/3.6.1 EC-3.6.1] | + | ** NEGATIVE |
| | + | * left end position: |
| | + | ** 1012 |
| | + | * centisome position: |
| | + | ** 15.492958 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]] |
| − | ** 1 [[WATER]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P]][c] '''=>''' 1 [[DIHYDRO-NEO-PTERIN]][c] '''+''' 1 [[Pi]][c]
| + | ** Source: [[annotation-in-silico_annotation]] |
| − | * With common name(s):
| + | *** Assignment: ec-number |
| − | ** 1 H2O[c] '''+''' 1 7,8-dihydroneopterin 3'-phosphate[c] '''=>''' 1 7,8-dihydroneopterin[c] '''+''' 1 phosphate[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_15988]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]] | + | |
| − | * [[Tiso_gene_10760]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | * [[Tiso_gene_2019]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_2747]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | * [[Tiso_gene_10288]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_5713]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_1142]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_18343]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_13784]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_17467]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_8601]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_19075]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_4645]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_8599]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_6767]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_12514]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_2924]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_3667]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_1799]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_10158]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_4112]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_6144]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_16176]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_43]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_13729]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_15582]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_277]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_3314]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_16712]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_6277]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_8600]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_13604]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_17804]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_12636]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_13847]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_14428]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | * [[Tiso_gene_11387]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_7067]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
| + | |
| − | ** '''4''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
| + | |
| − | ** '''3''' reactions found over '''7''' reactions in the full pathway | + | |
| − | * [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147] | + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: right end position=6289}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25306 25306]
| + | {{#set: transcription direction=NEGATIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: left end position=1012}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R04621 R04621]
| + | {{#set: centisome position=15.492958 }} |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}} |
| − | {{#set: ec number=EC-3.6.1}} | + | |
| − | {{#set: gene associated=Tiso_gene_15988|Tiso_gene_10760|Tiso_gene_2019|Tiso_gene_2747|Tiso_gene_10288|Tiso_gene_5713|Tiso_gene_1142|Tiso_gene_18343|Tiso_gene_13784|Tiso_gene_17467|Tiso_gene_8601|Tiso_gene_19075|Tiso_gene_4645|Tiso_gene_8599|Tiso_gene_6767|Tiso_gene_12514|Tiso_gene_2924|Tiso_gene_3667|Tiso_gene_1799|Tiso_gene_10158|Tiso_gene_4112|Tiso_gene_6144|Tiso_gene_16176|Tiso_gene_43|Tiso_gene_13729|Tiso_gene_15582|Tiso_gene_277|Tiso_gene_3314|Tiso_gene_16712|Tiso_gene_6277|Tiso_gene_8600|Tiso_gene_13604|Tiso_gene_17804|Tiso_gene_12636|Tiso_gene_13847|Tiso_gene_14428|Tiso_gene_11387|Tiso_gene_7067}} | + | |
| − | {{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}} | + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
