Difference between revisions of "RXN-11638"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UMPP UMPP] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine 5'-monophosphate phosphohydro...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] == * direction: ** LEFT-TO-RIGHT * common name: ** ribosomal_rna_small_subunit...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** ribosomal_rna_small_subunit_methyltransferase_h |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.1.1.199 EC-2.1.1.199] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[16S-rRNA-cytidine1402]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[16S-rRNA-N4-methylcytidine1402]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a cytidine1402 in 16S rRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 an N4-methylcytidine1402 in 16S rRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_17723]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | ** | + | ** Source: [[annotation-experimental_annotation]] |
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=ribosomal_rna_small_subunit_methyltransferase_h}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-2.1.1.199}} |
| + | {{#set: gene associated=Tiso_gene_17723}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 20:28, 21 March 2018
Contents
Reaction RXN-11638
- direction:
- LEFT-TO-RIGHT
- common name:
- ribosomal_rna_small_subunit_methyltransferase_h
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 16S-rRNA-cytidine1402[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 PROTON[c] + 1 16S-rRNA-N4-methylcytidine1402[c] + 1 ADENOSYL-HOMO-CYS[c]
- With common name(s):
- 1 a cytidine1402 in 16S rRNA[c] + 1 S-adenosyl-L-methionine[c] => 1 H+[c] + 1 an N4-methylcytidine1402 in 16S rRNA[c] + 1 S-adenosyl-L-homocysteine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_17723
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
