Difference between revisions of "ISOCHORSYN-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_66 == * left end position: ** 44448 * transcription direction: ** NEGATIVE * right end position: ** 46625 * centisome position: ** 84.36716...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCHORSYN-RXN ISOCHORSYN-RXN] == * direction: ** REVERSIBLE * common name: ** isochorismate_syntha...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCHORSYN-RXN ISOCHORSYN-RXN] == |
− | * | + | * direction: |
− | + | ** REVERSIBLE | |
− | + | * common name: | |
− | ** | + | ** isochorismate_synthase |
− | * | + | * ec number: |
− | ** | + | ** [http://enzyme.expasy.org/EC/5.4.4.2 EC-5.4.4.2] |
− | * | + | |
− | ** | + | |
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** in-silico_annotation | + | ** 1 [[CHORISMATE]][c] '''<=>''' 1 [[ISOCHORISMATE]][c] |
− | *** | + | * With common name(s): |
− | == Pathways | + | ** 1 chorismate[c] '''<=>''' 1 isochorismate[c] |
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_14767]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | * Gene: [[Tiso_gene_17551]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | == Pathways == | ||
+ | * [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837] | ||
+ | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-5901]], 2,3-dihydroxybenzoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5901 PWY-5901] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6406]], salicylate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6406 PWY-6406] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18985 18985] |
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01717 R01717] |
− | {{#set: | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P23973 P23973] | ||
+ | ** [http://www.uniprot.org/uniprot/P44613 P44613] | ||
+ | ** [http://www.uniprot.org/uniprot/P74053 P74053] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AEJ2 P0AEJ2] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=isochorismate_synthase}} | ||
+ | {{#set: ec number=EC-5.4.4.2}} | ||
+ | {{#set: gene associated=Tiso_gene_14767|Tiso_gene_17551}} | ||
+ | {{#set: in pathway=PWY-5837|PWY-5901|PWY-6406}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 19:57, 21 March 2018
Contents
Reaction ISOCHORSYN-RXN
- direction:
- REVERSIBLE
- common name:
- isochorismate_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CHORISMATE[c] <=> 1 ISOCHORISMATE[c]
- With common name(s):
- 1 chorismate[c] <=> 1 isochorismate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_14767
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-synechocystis
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_17551
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
Pathways
- PWY-5837, 1,4-dihydroxy-2-naphthoate biosynthesis: PWY-5837
- 4 reactions found over 7 reactions in the full pathway
- PWY-5901, 2,3-dihydroxybenzoate biosynthesis: PWY-5901
- 2 reactions found over 3 reactions in the full pathway
- PWY-6406, salicylate biosynthesis I: PWY-6406
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-synechocystis
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links