Difference between revisions of "RXN-13616"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9413 RXN-9413] == * direction: ** LEFT-TO-RIGHT * common name: ** limonene-12-epoxide_hydrolase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9413 RXN-9413] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** limonene-12-epoxide_hydrolase_protein
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.3.2.8 EC-3.3.2.8]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[4S-limonene-1-2-epoxides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-10055]][c]
+
** 1 [[T2-DECENOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2244]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a (4S)-1,2-epoxymenth-8-ene[c] '''+''' 1 H2O[c] '''=>''' 1 (1R,2R,4S)-limonene-1,2-diol[c]
+
** 1 trans-dec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxydecanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_15422]]
+
* Gene: [[Tiso_gene_14262]]
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_6885]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_16145]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5924]], limonene degradation II (L-limonene): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5924 PWY-5924]
+
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[annotation]]
+
* Category: [[orthology]]
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31193 31193]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04744 R04744]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=limonene-12-epoxide_hydrolase_protein}}
+
{{#set: ec number=EC-4.2.1.17}}
{{#set: ec number=EC-3.3.2.8}}
+
{{#set: gene associated=Tiso_gene_14262|Tiso_gene_6885|Tiso_gene_16145}}
{{#set: gene associated=Tiso_gene_15422}}
+
{{#set: in pathway=PWY-7094}}
{{#set: in pathway=PWY-5924}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:57, 21 March 2018

Reaction RXN-13616

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-dec-2-enoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxydecanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links