Difference between revisions of "PWY-2681"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] == * direction: ** LEFT-TO-RIGHT * common name: ** ribosomal_rna_small_subunit...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
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** ribosomal_rna_small_subunit_methyltransferase_h
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** trans-zeatin biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.199 EC-2.1.1.199]
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* Synonym(s):
 
* Synonym(s):
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** trans-cytokinin biosynthesis
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** AMP-dependent cytokinin biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''11''' reactions in the full pathway
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[16S-rRNA-cytidine1402]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[16S-rRNA-N4-methylcytidine1402]][c]
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* [[RXN-4303]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytidine1402 in 16S rRNA[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 an N4-methylcytidine1402  in 16S rRNA[c]
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*** [[Tiso_gene_3274]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_17723]]
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* [[RXN-4305]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_3274]]
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** EXPERIMENTAL_ANNOTATION
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** 2 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[orthology-athaliana]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* [[annotation]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4304 RXN-4304]
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** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4306 RXN-4306]
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*** [[experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4307 RXN-4307]
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*** [[in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4308 RXN-4308]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4310 RXN-4310]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4312 RXN-4312]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4313 RXN-4313]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4314 RXN-4314]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4317 RXN-4317]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: common name=ribosomal_rna_small_subunit_methyltransferase_h}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-2681 PWY-2681]
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{{#set: ec number=EC-2.1.1.199}}
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{{#set: taxonomic range=TAX-3193}}
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{{#set: gene associated=Tiso_gene_17723}}
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{{#set: common name=trans-zeatin biosynthesis}}
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{{#set: in pathway=}}
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{{#set: common name=trans-cytokinin biosynthesis|AMP-dependent cytokinin biosynthesis}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=2}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: total reaction=11}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: completion rate=18.0}}

Latest revision as of 19:28, 21 March 2018

Pathway PWY-2681

  • taxonomic range:
  • common name:
    • trans-zeatin biosynthesis
  • Synonym(s):
    • trans-cytokinin biosynthesis
    • AMP-dependent cytokinin biosynthesis

Reaction(s) found

2 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-2681&oldid=41847"