Difference between revisions of "RXN-16659"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-oxo-decanoyl-ACPs 3-oxo-decanoyl-ACPs] == * common name: ** a 3-oxo-decanoyl-[acp] * Synonym(...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16659 RXN-16659] == * direction: ** LEFT-TO-RIGHT * common name: ** peptidoglycan transpeptidas...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16659 RXN-16659] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** peptidoglycan transpeptidase (Gram-negative bacteria) |
| + | ** beta-lactamase | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == Reaction | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | = | + | ** 1 [[CPD-17927]][c] '''+''' 1 [[CPD-17931]][c] '''=>''' 1 [[D-ALANINE]][c] '''+''' 1 [[CPD-17932]][c] |
| − | * [[ | + | * With common name(s): |
| − | * [[ | + | ** 1 a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide[c] '''+''' 1 a peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide[c] '''=>''' 1 D-alanine[c] '''+''' 1 a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)[c] |
| − | == | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_18870]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY0-1586]], peptidoglycan maturation (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1586 PWY0-1586] | ||
| + | ** '''2''' reactions found over '''12''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name= | + | {{#set: common name=peptidoglycan transpeptidase (Gram-negative bacteria)}} |
| − | {{#set: | + | {{#set: common name=beta-lactamase}} |
| − | {{#set: | + | {{#set: ec number=EC-3.4.16.4}} |
| + | {{#set: gene associated=Tiso_gene_18870}} | ||
| + | {{#set: in pathway=PWY0-1586}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:28, 21 March 2018
Contents
Reaction RXN-16659
- direction:
- LEFT-TO-RIGHT
- common name:
- peptidoglycan transpeptidase (Gram-negative bacteria)
- beta-lactamase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide[c] + 1 a peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide[c] => 1 D-alanine[c] + 1 a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_18870
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY0-1586, peptidoglycan maturation (meso-diaminopimelate containing): PWY0-1586
- 2 reactions found over 12 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
