Difference between revisions of "PYRROLINECARBREDUCT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.90-RXN 2.7.1.90-RXN] == * direction: ** REVERSIBLE * common name: ** ORF * ec number: ** [htt...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.90-RXN 2.7.1.90-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
 +
** pyrroline-5-carboxylate_reductase
 
** ORF
 
** ORF
 +
** ankyrin_repeat-containing_protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.90 EC-2.7.1.90]
+
** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PPI]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''<=>''' 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 diphosphate[c] '''+''' 1 &beta;-D-fructofuranose 6-phosphate[c] '''<=>''' 1 fructose 1,6-bisphosphate[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
+
** 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 NAD(P)H[c] '''+''' 2 H+[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_596]]
+
* Gene: [[Tiso_gene_8625]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_20218]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_19254]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17059]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
+
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13613 13613]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00764 R00764]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21342 P21342]
+
** [http://www.uniprot.org/uniprot/P32322 P32322]
−
** [http://www.uniprot.org/uniprot/P29495 P29495]
+
** [http://www.uniprot.org/uniprot/P27771 P27771]
−
** [http://www.uniprot.org/uniprot/O83146 O83146]
+
** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
−
** [http://www.uniprot.org/uniprot/O84210 O84210]
+
** [http://www.uniprot.org/uniprot/P14383 P14383]
−
** [http://www.uniprot.org/uniprot/P21343 P21343]
+
** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
−
** [http://www.uniprot.org/uniprot/O51669 O51669]
+
** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
−
** [http://www.uniprot.org/uniprot/Q27651 Q27651]
+
** [http://www.uniprot.org/uniprot/Q12740 Q12740]
−
** [http://www.uniprot.org/uniprot/Q27659 Q27659]
+
** [http://www.uniprot.org/uniprot/P22008 P22008]
−
** [http://www.uniprot.org/uniprot/O81437 O81437]
+
** [http://www.uniprot.org/uniprot/P54904 P54904]
−
** [http://www.uniprot.org/uniprot/Q9STQ7 Q9STQ7]
+
** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
−
** [http://www.uniprot.org/uniprot/Q41140 Q41140]
+
** [http://www.uniprot.org/uniprot/P17817 P17817]
−
** [http://www.uniprot.org/uniprot/Q41141 Q41141]
+
** [http://www.uniprot.org/uniprot/P32263 P32263]
−
** [http://www.uniprot.org/uniprot/Q9M076 Q9M076]
+
** [http://www.uniprot.org/uniprot/Q12641 Q12641]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P46725 P46725]
 +
** [http://www.uniprot.org/uniprot/P74572 P74572]
 +
** [http://www.uniprot.org/uniprot/Q04708 Q04708]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=pyrroline-5-carboxylate_reductase}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: ec number=EC-2.7.1.90}}
+
{{#set: common name=ankyrin_repeat-containing_protein}}
−
{{#set: gene associated=Tiso_gene_596}}
+
{{#set: ec number=EC-1.5.1.2}}
−
{{#set: in pathway=PWY-1042}}
+
{{#set: gene associated=Tiso_gene_8625|Tiso_gene_20218|Tiso_gene_19254|Tiso_gene_17059}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:06, 21 March 2018

Reaction PYRROLINECARBREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyrroline-5-carboxylate_reductase
    • ORF
    • ankyrin_repeat-containing_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






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