Difference between revisions of "R06284"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R06284 R06284] == * direction: ** LEFT-TO-RIGHT * common name: ** R129 * Synonym(s): == Reaction F...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R06284 R06284] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** arginyl-trna_synthetase
+
** R129
−
** arginine-trna_ligase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[ARG]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c]
+
** 1.0 [[Chlorophyllides]][c] '''+''' 1.0 [[PHYTYL-PYROPHOSPHATE]][c] '''=>''' 1.0 [[PPI]][c] '''+''' 1.0 [[CHLOROPHYLL-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 a tRNAarg[c] '''+''' 1 L-arginine[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-arginyl-[tRNAarg][c]
+
** 1.0 a chlorophyllide[c] '''+''' 1.0 phytyl diphosphate[c] '''=>''' 1.0 diphosphate[c] '''+''' 1.0 chlorophyll a[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12997]]
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* Gene: [[Tiso_gene_19542]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-synechocystis]]
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***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16360]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P40329 P40329]
 
−
** [http://www.uniprot.org/uniprot/P35868 P35868]
 
−
** [http://www.uniprot.org/uniprot/P43832 P43832]
 
−
** [http://www.uniprot.org/uniprot/O51540 O51540]
 
−
** [http://www.uniprot.org/uniprot/O67068 O67068]
 
−
** [http://www.uniprot.org/uniprot/O59147 O59147]
 
−
** [http://www.uniprot.org/uniprot/O83803 O83803]
 
−
** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
 
−
** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
 
−
** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
 
−
** [http://www.uniprot.org/uniprot/P46906 P46906]
 
−
** [http://www.uniprot.org/uniprot/Q57689 Q57689]
 
−
** [http://www.uniprot.org/uniprot/O27496 O27496]
 
−
** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
 
−
** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
 
−
** [http://www.uniprot.org/uniprot/P56128 P56128]
 
−
** [http://www.uniprot.org/uniprot/P47618 P47618]
 
−
** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
 
−
** [http://www.uniprot.org/uniprot/Q08888 Q08888]
 
−
** [http://www.uniprot.org/uniprot/P54136 P54136]
 
−
** [http://www.uniprot.org/uniprot/P38714 P38714]
 
−
** [http://www.uniprot.org/uniprot/Q05506 Q05506]
 
−
** [http://www.uniprot.org/uniprot/P75222 P75222]
 
−
** [http://www.uniprot.org/uniprot/P11875 P11875]
 
−
** [http://www.uniprot.org/uniprot/O23247 O23247]
 
−
** [http://www.uniprot.org/uniprot/O74781 O74781]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=arginyl-trna_synthetase}}
+
{{#set: common name=R129}}
−
{{#set: common name=arginine-trna_ligase}}
+
{{#set: gene associated=Tiso_gene_19542}}
−
{{#set: ec number=EC-6.1.1.19}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_12997|Tiso_gene_16360}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: reconstruction source=orthology-synechocystis}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:59, 21 March 2018

Reaction R06284

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • R129
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R06284&oldid=45041"