Difference between revisions of "RXN-13441"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14387 RXN-14387] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13441 RXN-13441] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14387 RXN-14387] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13441 RXN-13441] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CD-2S-SP-Complex]][c] '''+''' 2 [[FE+3]][c] '''=>''' 1 [[CD-SP-2Fe2S-Complex]][c]
+
** 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14422]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c] '''+''' 2 Fe3+[c] '''=>''' 1 a [cysteine desulfurase]-[scaffold protein-(2Fe-2S)] complex[c]
+
** 1 α-linolenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 3-oxo-icosatrienoyl-CoA[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_15502]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
+
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=Tiso_gene_15502}}
+
{{#set: ec number=EC-2.3.1.199}}
−
{{#set: in pathway=PWY-7250}}
+
{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:59, 21 March 2018

Reaction RXN-13441

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): PWY-7602
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7619, juniperonate biosynthesis: PWY-7619
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13441&oldid=45054"