Difference between revisions of "RXN-11109"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_5207 == * Synonym(s): == Reactions associated == * PEPTIDYLPROLYL-ISOMERASE-RXN ** pantograph-esiliculosus == Pathways associa...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] == * direction: ** LEFT-TO-RIGHT * common name: ** atp-dependent_rna_helicase_...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_5207 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** atp-dependent_rna_helicase_ded1
 +
** rna_helicase
 +
** dead_box_rna_helicase
 +
** ORF
 +
** dead_box_helicase
 +
** atp-dependent_rna_helicase-like_protein_db10
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.6.4.13 EC-3.6.4.13]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
+
* With identifiers:
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 [[Wound-RNA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Unwound-RNA]][c] '''+''' 1 [[PROTON]][c]
−
== Pathways associated ==
+
* With common name(s):
 +
** 1 wound RNA[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 an unwound RNA[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_13862]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15465]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11551]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_5272]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17804]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9370]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_13864]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14774]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17819]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13863]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=atp-dependent_rna_helicase_ded1}}
 +
{{#set: common name=rna_helicase}}
 +
{{#set: common name=dead_box_rna_helicase}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=dead_box_helicase}}
 +
{{#set: common name=atp-dependent_rna_helicase-like_protein_db10}}
 +
{{#set: ec number=EC-3.6.4.13}}
 +
{{#set: gene associated=Tiso_gene_13862|Tiso_gene_15465|Tiso_gene_11551|Tiso_gene_5272|Tiso_gene_17804|Tiso_gene_9370|Tiso_gene_13864|Tiso_gene_14774|Tiso_gene_17819|Tiso_gene_13863}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:59, 21 March 2018

Reaction RXN-11109

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • atp-dependent_rna_helicase_ded1
    • rna_helicase
    • dead_box_rna_helicase
    • ORF
    • dead_box_helicase
    • atp-dependent_rna_helicase-like_protein_db10
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 wound RNA[c] + 1 ATP[c] + 1 H2O[c] => 1 phosphate[c] + 1 ADP[c] + 1 an unwound RNA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11109&oldid=45128"