Difference between revisions of "RXN-12440"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17859 RXN-17859] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] == * direction: ** LEFT-TO-RIGHT * common name: ** ascorbate_peroxidase * ec n...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17859 RXN-17859] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ascorbate_peroxidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.bu EC-2.3.1.bu]
+
** [http://enzyme.expasy.org/EC/1.11.1.11 EC-1.11.1.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[N-terminal-L-valine]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[N-Ac-N-terminal-L-valine]][c] '''+''' 1 [[CO-A]][c]
+
** 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[ASCORBATE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N-terminal L-valyl-[protein][c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 an N-terminal Nα-acetyl-L-valyl-[protein][c] '''+''' 1 coenzyme A[c]
+
** 2 L-ascorbate[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 H+[c] '''=>''' 2 H2O[c] '''+''' 1 L-ascorbate[c] '''+''' 1 L-dehydro-ascorbate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_16028]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_5435]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_15962]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
+
* [[PWY-6960]], L-ascorbate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6960 PWY-6960]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6959]], L-ascorbate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6959 PWY-6959]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.3.1.bu}}
+
{{#set: common name=ascorbate_peroxidase}}
−
{{#set: in pathway=PWY-7800}}
+
{{#set: ec number=EC-1.11.1.11}}
 +
{{#set: gene associated=Tiso_gene_16028|Tiso_gene_5435|Tiso_gene_15962}}
 +
{{#set: in pathway=PWY-6960|PWY-6959|PWY-6961}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:00, 21 March 2018

Reaction RXN-12440

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ascorbate_peroxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6960, L-ascorbate degradation III: PWY-6960
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6959, L-ascorbate degradation V: PWY-6959
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6961, L-ascorbate degradation II (bacterial, aerobic): PWY-6961
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12440&oldid=45171"