Difference between revisions of "CPD-17049"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-_d...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17049 CPD-17049] == * smiles: ** C(O)C2(S)(NC(=O)C(S)(CC1(=CC=CC=C1))NC(=O)2) * common name...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17049 CPD-17049] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(O)C2(S)(NC(=O)C(S)(CC1(=CC=CC=C1))NC(=O)2)
 
* common name:
 
* common name:
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** acyl-_dehydrogenase
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** 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine
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** Acyl-CoA dehydrogenase
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* inchi key:
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** acyl-CoA_dehydrogenase
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** InChIKey=VZGSJJJQZPTKGR-VXGBXAGGSA-N
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
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** 298.374   
 
* Synonym(s):
 
* Synonym(s):
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** fatty acyl coenzyme A dehydrogenase
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** 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-DKP
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** acyl coenzyme A dehydrogenase
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** 3-benzyl-3,6 -dithio-6-(hydroxymethyl)piperazine-2,5-dione
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** fatty-acyl-CoA dehydrogenase
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** 3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)-diketopiperazine
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** general acyl CoA dehydrogenase
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** 3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)-DKP
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** medium-chain acyl-coenzyme A dehydrogenase
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** 3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)piperazine-2,5-dione
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** long-chain acyl coenzyme A dehydrogenase
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** long-chain acyl-CoA dehydrogenase
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-15684]]
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** 1 [[ETF-Oxidized]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 H+[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 a trans-2-enoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5449]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16631]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8271]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6295]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8272]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7447]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10643]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_883]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14511]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6475]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16113]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P16219 P16219]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658023 90658023]
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** [http://www.uniprot.org/uniprot/P45952 P45952]
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{{#set: smiles=C(O)C2(S)(NC(=O)C(S)(CC1(=CC=CC=C1))NC(=O)2)}}
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** [http://www.uniprot.org/uniprot/P15651 P15651]
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{{#set: common name=3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine}}
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** [http://www.uniprot.org/uniprot/P11310 P11310]
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{{#set: inchi key=InChIKey=VZGSJJJQZPTKGR-VXGBXAGGSA-N}}
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** [http://www.uniprot.org/uniprot/P08503 P08503]
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{{#set: molecular weight=298.374    }}
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** [http://www.uniprot.org/uniprot/Q07417 Q07417]
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{{#set: common name=3-benzyl-3,6 -dithio-6-(hydroxymethyl)-DKP|3-benzyl-3,6 -dithio-6-(hydroxymethyl)piperazine-2,5-dione|3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)-diketopiperazine|3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)-DKP|3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)piperazine-2,5-dione}}
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** [http://www.uniprot.org/uniprot/Q54857 Q54857]
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{{#set: consumed by=RXN-15684}}
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** [http://www.uniprot.org/uniprot/P45867 P45867]
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** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
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** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
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** [http://www.uniprot.org/uniprot/Q96329 Q96329]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: common name=Acyl-CoA dehydrogenase}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: ec number=EC-1.3.8}}
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{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
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{{#set: gene associated=Tiso_gene_5449|Tiso_gene_16631|Tiso_gene_8271|Tiso_gene_6295|Tiso_gene_8272|Tiso_gene_7447|Tiso_gene_10643|Tiso_gene_883|Tiso_gene_14511|Tiso_gene_6475|Tiso_gene_16113}}
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{{#set: in pathway=FAO-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:00, 21 March 2018

Metabolite CPD-17049

  • smiles:
    • C(O)C2(S)(NC(=O)C(S)(CC1(=CC=CC=C1))NC(=O)2)
  • common name:
    • 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine
  • inchi key:
    • InChIKey=VZGSJJJQZPTKGR-VXGBXAGGSA-N
  • molecular weight:
    • 298.374
  • Synonym(s):
    • 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-DKP
    • 3-benzyl-3,6 -dithio-6-(hydroxymethyl)piperazine-2,5-dione
    • 3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)-diketopiperazine
    • 3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)-DKP
    • 3-benzyl-3,6 -disulfanyl- 6-(hydroxymethyl)piperazine-2,5-dione

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-17049&oldid=45222"