Difference between revisions of "Tiso gene 15144"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] == * direction: ** REVERSIBLE * common name: ** aspartate_aminotransferase **...")
(Created page with "Category:Gene == Gene Tiso_gene_15144 == * right end position: ** 4970 * transcription direction: ** NEGATIVE * left end position: ** 46 * centisome position: ** 0.8834261...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] ==
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== Gene Tiso_gene_15144 ==
* direction:
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* right end position:
** REVERSIBLE
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** 4970
* common name:
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* transcription direction:
** aspartate_aminotransferase
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** NEGATIVE
** aminotransferase
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* left end position:
* ec number:
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** 46
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
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* centisome position:
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** 0.88342613   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[PYRUVATE-CARBOXYLASE-RXN]]
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c]
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* With common name(s):
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** 1 L-aspartate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 oxaloacetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13538]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17809]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12889]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6815]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15680]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17718]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6142]]
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* [[PWY-6146]]
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* [[P42-PWY]]
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* [[PWY-5750]]
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* [[PWY66-399]]
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
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{{#set: right end position=4970}}
{{#set: common name=aspartate_aminotransferase}}
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{{#set: transcription direction=NEGATIVE}}
{{#set: common name=aminotransferase}}
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{{#set: left end position=46}}
{{#set: ec number=EC-2.6.1.1}}
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{{#set: centisome position=0.88342613    }}
{{#set: gene associated=Tiso_gene_13538|Tiso_gene_17809|Tiso_gene_12889|Tiso_gene_6815|Tiso_gene_15680|Tiso_gene_17718}}
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{{#set: reaction associated=PYRUVATE-CARBOXYLASE-RXN}}
{{#set: in pathway=PWY-7117|PWY-7115}}
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{{#set: pathway associated=PWY-6142|PWY-6146|P42-PWY|PWY-5750|PWY66-399}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:02, 21 March 2018

Gene Tiso_gene_15144

  • right end position:
    • 4970
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 46
  • centisome position:
    • 0.88342613
  • Synonym(s):

Reactions associated

Pathways associated

External links