Difference between revisions of "Tiso gene 12712"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
(Created page with "Category:Gene == Gene Tiso_gene_12712 == * right end position: ** 6361 * transcription direction: ** POSITIVE * left end position: ** 5136 * centisome position: ** 75.9089...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] ==
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== Gene Tiso_gene_12712 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6361
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* common name:
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* transcription direction:
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** thymidine_phosphorylase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.4.23 EC-2.7.4.23]
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** 5136
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* centisome position:
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** 75.90896   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
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** 1 [[RIBOSE-15-BISPHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PRPP]][c] '''+''' 1 [[ADP]][c]
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* With common name(s):
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** 1 α-D-ribose 1,5-bisphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1011]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY0-661]], PRPP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-661 PWY0-661]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6361}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20109 20109]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5136}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06836 R06836]
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{{#set: centisome position=75.90896    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PROTEIN-TYROSINE-PHOSPHATASE-RXN}}
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{{#set: common name=thymidine_phosphorylase}}
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{{#set: ec number=EC-2.7.4.23}}
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{{#set: gene associated=Tiso_gene_1011}}
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{{#set: in pathway=PWY-7805|PWY0-661|PWY-7807}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:02, 21 March 2018

Gene Tiso_gene_12712

  • right end position:
    • 6361
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5136
  • centisome position:
    • 75.90896
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12712&oldid=45474"