Difference between revisions of "Tiso gene 8389"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** carbonic_anhyd...")
(Created page with "Category:Gene == Gene Tiso_gene_8389 == * right end position: ** 8885 * transcription direction: ** NEGATIVE * left end position: ** 5812 * centisome position: ** 56.43814...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] ==
+
== Gene Tiso_gene_8389 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 8885
−
* common name:
+
* transcription direction:
−
** carbonic_anhydrase
+
** NEGATIVE
−
** ORF
+
* left end position:
−
** beta-type_carbonic_anhydrase
+
** 5812
−
** gamma_carbonic_anhydrase
+
* centisome position:
−
** alpha_ca
+
** 56.43814   
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[GSHTRAN-RXN]]
−
** 1 [[H2CO3]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 carbonic acid[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
* Reaction: [[GST-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_19413]]
+
*** Assignment: ec-number
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
* [[Tiso_gene_1600]]
+
* Reaction: [[RXN-13673]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
** [[pantograph]]-[[esiliculosus]]
+
* Reaction: [[RXN-15680]]
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_19414]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_7660]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_18927]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17511]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9852]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3056]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_20230]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6150]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-7112]]
 +
* [[PWY-6842]]
 +
* [[PWY-4061]]
 +
* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=8885}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=5812}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00132 R00132]
+
{{#set: centisome position=56.43814    }}
−
* UNIPROT:
+
{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
−
** [http://www.uniprot.org/uniprot/P07450 P07450]
+
{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
−
** [http://www.uniprot.org/uniprot/P07452 P07452]
+
−
** [http://www.uniprot.org/uniprot/P13634 P13634]
+
−
** [http://www.uniprot.org/uniprot/P08060 P08060]
+
−
** [http://www.uniprot.org/uniprot/P16016 P16016]
+
−
** [http://www.uniprot.org/uniprot/P20507 P20507]
+
−
** [http://www.uniprot.org/uniprot/P16015 P16015]
+
−
** [http://www.uniprot.org/uniprot/P40881 P40881]
+
−
** [http://www.uniprot.org/uniprot/Q7LZP1 Q7LZP1]
+
−
** [http://www.uniprot.org/uniprot/Q8X938 Q8X938]
+
−
** [http://www.uniprot.org/uniprot/P00921 P00921]
+
−
** [http://www.uniprot.org/uniprot/P00917 P00917]
+
−
** [http://www.uniprot.org/uniprot/P00915 P00915]
+
−
** [http://www.uniprot.org/uniprot/P00918 P00918]
+
−
** [http://www.uniprot.org/uniprot/P07451 P07451]
+
−
** [http://www.uniprot.org/uniprot/P22748 P22748]
+
−
** [http://www.uniprot.org/uniprot/P35218 P35218]
+
−
** [http://www.uniprot.org/uniprot/P43166 P43166]
+
−
** [http://www.uniprot.org/uniprot/P00916 P00916]
+
−
** [http://www.uniprot.org/uniprot/P00920 P00920]
+
−
** [http://www.uniprot.org/uniprot/P00922 P00922]
+
−
** [http://www.uniprot.org/uniprot/O24855 O24855]
+
−
** [http://www.uniprot.org/uniprot/Q9PIQ7 Q9PIQ7]
+
−
** [http://www.uniprot.org/uniprot/P14141 P14141]
+
−
** [http://www.uniprot.org/uniprot/P43165 P43165]
+
−
** [http://www.uniprot.org/uniprot/P07630 P07630]
+
−
** [http://www.uniprot.org/uniprot/P27139 P27139]
+
−
** [http://www.uniprot.org/uniprot/P35219 P35219]
+
−
** [http://www.uniprot.org/uniprot/Q7M317 Q7M317]
+
−
** [http://www.uniprot.org/uniprot/Q7M316 Q7M316]
+
−
** [http://www.uniprot.org/uniprot/P0ABE9 P0ABE9]
+
−
** [http://www.uniprot.org/uniprot/P18761 P18761]
+
−
** [http://www.uniprot.org/uniprot/P17067 P17067]
+
−
** [http://www.uniprot.org/uniprot/P23589 P23589]
+
−
** [http://www.uniprot.org/uniprot/P24258 P24258]
+
−
** [http://www.uniprot.org/uniprot/P27140 P27140]
+
−
** [http://www.uniprot.org/uniprot/P27134 P27134]
+
−
** [http://www.uniprot.org/uniprot/P46510 P46510]
+
−
** [http://www.uniprot.org/uniprot/P46511 P46511]
+
−
** [http://www.uniprot.org/uniprot/P46512 P46512]
+
−
** [http://www.uniprot.org/uniprot/P46281 P46281]
+
−
** [http://www.uniprot.org/uniprot/P18915 P18915]
+
−
** [http://www.uniprot.org/uniprot/Q41728 Q41728]
+
−
** [http://www.uniprot.org/uniprot/Q41729 Q41729]
+
−
** [http://www.uniprot.org/uniprot/P27141 P27141]
+
−
** [http://www.uniprot.org/uniprot/Q40628 Q40628]
+
−
** [http://www.uniprot.org/uniprot/Q08056 Q08056]
+
−
** [http://www.uniprot.org/uniprot/P40880 P40880]
+
−
** [http://www.uniprot.org/uniprot/Q39588 Q39588]
+
−
** [http://www.uniprot.org/uniprot/P93108 P93108]
+
−
** [http://www.uniprot.org/uniprot/Q92051 Q92051]
+
−
** [http://www.uniprot.org/uniprot/O04855 O04855]
+
−
** [http://www.uniprot.org/uniprot/Q41088 Q41088]
+
−
** [http://www.uniprot.org/uniprot/Q41089 Q41089]
+
−
** [http://www.uniprot.org/uniprot/P46513 P46513]
+
−
** [http://www.uniprot.org/uniprot/O04846 O04846]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=carbonic_anhydrase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=beta-type_carbonic_anhydrase}}
+
−
{{#set: common name=gamma_carbonic_anhydrase}}
+
−
{{#set: common name=alpha_ca}}
+
−
{{#set: ec number=EC-4.2.1.1}}
+
−
{{#set: gene associated=Tiso_gene_19413|Tiso_gene_1600|Tiso_gene_19414|Tiso_gene_7660|Tiso_gene_18927|Tiso_gene_17511|Tiso_gene_9852|Tiso_gene_3056|Tiso_gene_20230|Tiso_gene_6150}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:04, 21 March 2018

Gene Tiso_gene_8389

  • right end position:
    • 8885
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5812
  • centisome position:
    • 56.43814
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8389&oldid=45638"