Difference between revisions of "2.7.7.13-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13414 RXN-13414] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.13-RXN 2.7.7.13-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13414 RXN-13414] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.13-RXN 2.7.7.13-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.7.13 EC-2.7.7.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SPERMIDINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14378]][c]
+
** 1 [[MANNOSE-1P]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GDP-MANNOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 spermidine[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 dehydrospermidine[c]
+
** 1 α-D-mannose 1-phosphate[c] '''+''' 1 GTP[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 GDP-α-D-mannose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_14704]]
 +
** Source: [[orthology-synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5905]], hypusine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5905 PWY-5905]
+
* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-synechocystis]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19908 19908]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15229 15229]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00885 R00885]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9TRF4 Q9TRF4]
 +
** [http://www.uniprot.org/uniprot/Q59427 Q59427]
 +
** [http://www.uniprot.org/uniprot/P41940 P41940]
 +
** [http://www.uniprot.org/uniprot/O22287 O22287]
 +
** [http://www.uniprot.org/uniprot/O74484 O74484]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=PWY-5905}}
+
{{#set: ec number=EC-2.7.7.13}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Tiso_gene_14704}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: in pathway=PWY-5659|PWY-882}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:04, 21 March 2018

Reaction 2.7.7.13-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-mannose 1-phosphate[c] + 1 GTP[c] + 1 H+[c] => 1 diphosphate[c] + 1 GDP-α-D-mannose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5659, GDP-mannose biosynthesis: PWY-5659
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




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