Difference between revisions of "CH33ADO"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] == * direction: ** LEFT-TO-RIGHT * common name: ** gdp-man:man_c_-pp-dol_alpha-_...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CH33ADO CH33ADO] == * smiles: ** CC1(OC(C(O)C(O)1)N3(C=NC2(C(N)=NC=NC=23))) * common name: ** 5...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CH33ADO CH33ADO] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC1(OC(C(O)C(O)1)N3(C=NC2(C(N)=NC=NC=23)))
 
* common name:
 
* common name:
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** gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase
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** 5'-deoxyadenosine
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.4.1.131 EC-2.4.1.131]
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** InChIKey=XGYIMTFOTBMPFP-KQYNXXCUSA-N
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* molecular weight:
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** 251.244   
 
* Synonym(s):
 
* Synonym(s):
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** CH3Ado
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-5162]][c] '''+''' 2 [[GDP-MANNOSE]][c] '''=>''' 2 [[GDP]][c] '''+''' 1 [[CPD-5164]][c] '''+''' 2 [[PROTON]][c]
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* [[RXN-14950]]
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* With common name(s):
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* [[RXN0-5063]]
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** 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 GDP-α-D-mannose[c] '''=>''' 2 GDP[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 H+[c]
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* [[RXN-14957]]
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* [[RXN-14959]]
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== Genes associated with this reaction  ==
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* [[RXN0-949]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-17473]]
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* [[Tiso_gene_15849]]
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* [[RXN-17472]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-8340]]
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* [[Tiso_gene_15372]]
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* [[HEMN-RXN]]
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** IN-SILICO_ANNOTATION
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* [[RXN-14480]]
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***EC-NUMBER
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* [[2.8.1.6-RXN]]
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== Pathways  ==
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== Reaction(s) of unknown directionality ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* BIGG : dad_5
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29523 29523]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=439182 439182]
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{{#set: common name=gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase}}
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* HMDB : HMDB01983
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{{#set: ec number=EC-2.4.1.131}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_15849|Tiso_gene_15372}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05198 C05198]
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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* CHEMSPIDER:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.chemspider.com/Chemical-Structure.388325.html 388325]
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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* CHEBI:
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17319 17319]
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* METABOLIGHTS : MTBLC17319
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{{#set: smiles=CC1(OC(C(O)C(O)1)N3(C=NC2(C(N)=NC=NC=23)))}}
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{{#set: common name=5'-deoxyadenosine}}
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{{#set: inchi key=InChIKey=XGYIMTFOTBMPFP-KQYNXXCUSA-N}}
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{{#set: molecular weight=251.244    }}
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{{#set: common name=CH3Ado}}
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{{#set: produced by=RXN-14950|RXN0-5063|RXN-14957|RXN-14959|RXN0-949|RXN-17473|RXN-17472|RXN-8340|HEMN-RXN|RXN-14480|2.8.1.6-RXN}}

Latest revision as of 20:04, 21 March 2018

Metabolite CH33ADO

  • smiles:
    • CC1(OC(C(O)C(O)1)N3(C=NC2(C(N)=NC=NC=23)))
  • common name:
    • 5'-deoxyadenosine
  • inchi key:
    • InChIKey=XGYIMTFOTBMPFP-KQYNXXCUSA-N
  • molecular weight:
    • 251.244
  • Synonym(s):
    • CH3Ado

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • BIGG : dad_5
  • PUBCHEM:
  • HMDB : HMDB01983
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC17319




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