Difference between revisions of "RXN-14136"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14957 RXN-14957] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoyl_synthase_mitochondri...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14957 RXN-14957] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** lipoyl_synthase_mitochondrial
+
** ORF
−
** lipoyl_mitochondrial
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.8.1.8 EC-2.8.1.8]
+
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[a-pyruvate-dehydrogenase-E2-protein-Nsup]][c] '''=>''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 2 [[MET]][c]
+
** 1 [[CPD0-2030]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[SER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 2 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-octanoyl-L-lysine[c] '''=>''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 2 an unsulfurated [sulfur carrier][c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 2 L-methionine[c]
+
** 1 glycerophosphoserine[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 L-serine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8049]]
+
* Gene: [[Tiso_gene_17232]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_437]]
+
* Gene: [[Tiso_gene_5334]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7382]], lipoate biosynthesis and incorporation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 32: Line 29:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29878 29878]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=lipoyl_synthase_mitochondrial}}
+
{{#set: common name=ORF}}
−
{{#set: common name=lipoyl_mitochondrial}}
+
{{#set: ec number=EC-3.1.4.46}}
−
{{#set: ec number=EC-2.8.1.8}}
+
{{#set: gene associated=Tiso_gene_17232|Tiso_gene_5334}}
−
{{#set: gene associated=Tiso_gene_8049|Tiso_gene_437}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-7382}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:05, 21 March 2018

Reaction RXN-14136

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 glycerophosphoserine[c] + 1 H2O[c] => 1 H+[c] + 1 sn-glycerol 3-phosphate[c] + 1 L-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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