Difference between revisions of "RXN-12171"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.8-RXN 1.8.4.8-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12171 RXN-12171] == * direction: ** REVERSIBLE * common name: ** thymidine_phosphorylase * ec n...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.8-RXN 1.8.4.8-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12171 RXN-12171] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** thymidine_phosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.4.8 EC-1.8.4.8]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SO3]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[3-5-ADP]][c] '''<=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[PAPS]][c]
+
** 1 [[Pi]][c] '''+''' 1 [[Maltodextrins]][c] '''<=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[Maltodextrins]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 sulfite[c] '''+''' 1 an oxidized thioredoxin[c] '''+''' 2 H+[c] '''+''' 1 adenosine 3',5'-bisphosphate[c] '''<=>''' 1 a reduced thioredoxin[c] '''+''' 1 3'-phosphoadenylyl-sulfate[c]
+
** 1 phosphate[c] '''+''' 1 a maltodextrin[c] '''<=>''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 a maltodextrin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15770]]
+
* Gene: [[Tiso_gene_1011]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[SO4ASSIM-PWY]], sulfate reduction I (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SO4ASSIM-PWY SO4ASSIM-PWY]
+
* [[PWY-6731]], starch degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6731 PWY-6731]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6737]], starch degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6737 PWY-6737]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11724 11724]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02021 R02021]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P17853 P17853]
 
−
** [http://www.uniprot.org/uniprot/P94498 P94498]
 
−
** [http://www.uniprot.org/uniprot/P17854 P17854]
 
−
** [http://www.uniprot.org/uniprot/Q55309 Q55309]
 
−
** [http://www.uniprot.org/uniprot/P52672 P52672]
 
−
** [http://www.uniprot.org/uniprot/P18408 P18408]
 
−
** [http://www.uniprot.org/uniprot/Q10270 Q10270]
 
−
** [http://www.uniprot.org/uniprot/P72794 P72794]
 
−
** [http://www.uniprot.org/uniprot/Q39619 Q39619]
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-1.8.4.8}}
+
{{#set: common name=thymidine_phosphorylase}}
−
{{#set: gene associated=Tiso_gene_15770}}
+
{{#set: ec number=EC-2.4.1.1}}
−
{{#set: in pathway=SO4ASSIM-PWY}}
+
{{#set: gene associated=Tiso_gene_1011}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-6731|PWY-6737}}
−
{{#set: reconstruction source=orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:07, 21 March 2018

Reaction RXN-12171

  • direction:
    • REVERSIBLE
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phosphate[c] + 1 a maltodextrin[c] <=> 1 α-D-glucopyranose 1-phosphate[c] + 1 a maltodextrin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6731, starch degradation III: PWY-6731
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6737, starch degradation V: PWY-6737
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12171&oldid=46038"