Difference between revisions of "PWY-6351"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-26 RXN1G-26] == * direction: ** LEFT-TO-RIGHT * common name: ** cis-delta5-3-oxo-C24:1-[acyl-...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-26 RXN1G-26] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** cis-delta5-3-oxo-C24:1-[acyl-carrier protein] synthase
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** D-myo-inositol (1,4,5)-trisphosphate biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.M1 EC-2.3.1.M1]
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* Synonym(s):
 
* Synonym(s):
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** IP3 biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[cis-delta3-behenoyl-ACPs]][c] '''=>''' 1 [[cis-delta5-3-oxo-lignoceroyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[1-PHOSPHATIDYLINOSITOL-KINASE-RXN]]
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* With common name(s):
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** 7 associated gene(s):
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** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a cis-docos-3-enoyl-[acp][c] '''=>''' 1 a cis-delta5-3-oxo-C24:1-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
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*** [[Tiso_gene_18530]]
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*** [[Tiso_gene_12389]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_2572]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_18529]]
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* [[Tiso_gene_19302]]
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*** [[Tiso_gene_17239]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_17238]]
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* [[Tiso_gene_15991]]
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*** [[Tiso_gene_17240]]
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** [[pantograph]]-[[esiliculosus]]
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** 3 reconstruction source(s) associated:
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* [[Tiso_gene_14485]]
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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* [[2.7.1.149-RXN]]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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** 0 associated gene:
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** [[annotation-experimental_annotation]]
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*** [[esiliculosus]]
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* [[2.7.1.68-RXN]]
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** 16 associated gene(s):
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*** [[Tiso_gene_2021]]
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*** [[Tiso_gene_17532]]
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*** [[Tiso_gene_1131]]
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*** [[Tiso_gene_15721]]
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*** [[Tiso_gene_14966]]
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*** [[Tiso_gene_2350]]
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*** [[Tiso_gene_11381]]
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*** [[Tiso_gene_15722]]
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*** [[Tiso_gene_14055]]
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*** [[Tiso_gene_17887]]
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*** [[Tiso_gene_9590]]
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*** [[Tiso_gene_2008]]
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*** [[Tiso_gene_730]]
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*** [[Tiso_gene_9249]]
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*** [[Tiso_gene_18887]]
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*** [[Tiso_gene_7487]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[2.7.8.11-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_6541]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[3.1.4.11-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_7561]]
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*** [[Tiso_gene_12019]]
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*** [[Tiso_gene_12020]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=cis-delta5-3-oxo-C24:1-[acyl-carrier protein] synthase}}
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{{#set: common name=D-myo-inositol (1,4,5)-trisphosphate biosynthesis}}
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{{#set: ec number=EC-2.3.1.M1}}
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{{#set: common name=IP3 biosynthesis}}
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{{#set: gene associated=Tiso_gene_19302|Tiso_gene_15991|Tiso_gene_14485}}
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{{#set: reaction found=5}}
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{{#set: in pathway=PWYG-321}}
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{{#set: total reaction=5}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:29, 21 March 2018

Pathway PWY-6351

  • taxonomic range:
  • common name:
    • D-myo-inositol (1,4,5)-trisphosphate biosynthesis
  • Synonym(s):
    • IP3 biosynthesis

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6351&oldid=41962"