Difference between revisions of "Tiso gene 4822"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7665 RXN-7665] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_re...")
(Created page with "Category:Gene == Gene Tiso_gene_4822 == * right end position: ** 15763 * transcription direction: ** POSITIVE * left end position: ** 12230 * centisome position: ** 68.642...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7665 RXN-7665] ==
+
== Gene Tiso_gene_4822 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 15763
−
* common name:
+
* transcription direction:
−
** geranylgeranyl_diphosphate_reductase
+
** POSITIVE
 +
* left end position:
 +
** 12230
 +
* centisome position:
 +
** 68.6423   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.1.3.66-RXN]]
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7004]][c] '''=>''' 1 [[CPD-7006]][c] '''+''' 1 [[NADP]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 dihydrogeranylgeranyl chlorophyll a[c] '''=>''' 1 tetrahydrogeranylgeranyl chlorophyll a[c] '''+''' 1 NADP+[c]
+
* Reaction: [[RXN-10959]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-10960]]
−
* [[Tiso_gene_2613]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
−
** Source: [[annotation-experimental_annotation]]
+
== Pathways associated ==
−
*** Tool: [[pathwaytools]]
+
* [[PWY-6368]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=15763}}
−
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: gene associated=Tiso_gene_2613}}
+
{{#set: left end position=12230}}
−
{{#set: in pathway=PWY-5064}}
+
{{#set: centisome position=68.6423    }}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reaction associated=3.1.3.66-RXN|RXN-10959|RXN-10960}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: pathway associated=PWY-6368}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:08, 21 March 2018

Gene Tiso_gene_4822

  • right end position:
    • 15763
  • transcription direction:
    • POSITIVE
  • left end position:
    • 12230
  • centisome position:
    • 68.6423
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4822&oldid=46229"