Difference between revisions of "RXN-11347"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11370 RXN-11370] == * direction: ** LEFT-TO-RIGHT * common name: ** diphthine_synthase * Synony...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11347 RXN-11347] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11370 RXN-11370] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11347 RXN-11347] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** diphthine_synthase
+
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-3-CARBOXY-3-AMINOPROPYL-L-HISTIDINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[2-3-CARBOXY-3-METHYLAMMONIOPROPYL-L-]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** 1 [[CPD-12258]][c] '''+''' 1 [[CPD-9646]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[CPD-12303]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2][c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 a 2-[(3S)-3-carboxy-3-(methylammonio)propyl]-L-histidine-[translation elongation factor 2][c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
** 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine[c] '''+''' 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''=>''' 1 UMP[c] '''+''' 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15743]]
+
* Gene: [[Tiso_gene_1604]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6470]], peptidoglycan biosynthesis V (β-lactam resistance): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6470 PWY-6470]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20145 20145]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04481 R04481]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q58670 Q58670]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=diphthine_synthase}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_15743}}
+
{{#set: ec number=EC-2.7.8.13}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_1604}}
 +
{{#set: in pathway=PWY-6470}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:09, 21 March 2018

Reaction RXN-11347

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine[c] + 1 di-trans,octa-cis-undecaprenyl phosphate[c] => 1 UMP[c] + 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6470, peptidoglycan biosynthesis V (β-lactam resistance): PWY-6470
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11347&oldid=46409"