Difference between revisions of "Tiso gene 10459"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGPPHOSPHA-RXN PGPPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** protein-tyrosine_...")
(Created page with "Category:Gene == Gene Tiso_gene_10459 == * right end position: ** 7813 * transcription direction: ** NEGATIVE * left end position: ** 4527 * centisome position: ** 53.0901...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGPPHOSPHA-RXN PGPPHOSPHA-RXN] ==
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== Gene Tiso_gene_10459 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7813
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* common name:
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* transcription direction:
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** protein-tyrosine_phosphatase_mitochondrial_1
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.3.27 EC-3.1.3.27]
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** 4527
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* centisome position:
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** 53.090183   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.5.1.98-RXN]]
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** 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL]][c]
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* With common name(s):
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** 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 an L-1-phosphatidyl-sn-glycerol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18092]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=7813}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16725 16725]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=4527}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02029 R02029]
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{{#set: centisome position=53.090183    }}
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* UNIPROT:
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{{#set: reaction associated=3.5.1.98-RXN}}
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** [http://www.uniprot.org/uniprot/P18200 P18200]
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** [http://www.uniprot.org/uniprot/Q9JRA8 Q9JRA8]
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** [http://www.uniprot.org/uniprot/Q9PM65 Q9PM65]
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** [http://www.uniprot.org/uniprot/P0A924 P0A924]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=protein-tyrosine_phosphatase_mitochondrial_1}}
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{{#set: ec number=EC-3.1.3.27}}
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{{#set: gene associated=Tiso_gene_18092}}
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{{#set: in pathway=PWY4FS-7|PWY4FS-8|PWY-5269|PWY-7817|PWY-5668|PWY0-1545}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:10, 21 March 2018

Gene Tiso_gene_10459

  • right end position:
    • 7813
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4527
  • centisome position:
    • 53.090183
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10459&oldid=46474"