Difference between revisions of "RXN0-4222"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.1.4-RXN 1.8.1.4-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4222 RXN0-4222] == * direction: ** LEFT-TO-RIGHT * common name: ** exosome_complex_exonuclease...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.1.4-RXN 1.8.1.4-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4222 RXN0-4222] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** exosome_complex_exonuclease
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
+
** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1]
 
* Synonym(s):
 
* Synonym(s):
−
** E3 component of α-ketoacid dehydrogenase complexes
 
−
** Diaphorase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Dihydro-Lipoyl-Proteins]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD0-2351]][c] '''=>''' 1 [[Ribonucleoside-Monophosphates]][c] '''+''' 1 [[CPD0-2354]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [lipoyl-carrier protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c]
+
** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] '''=>''' 1 a ribonucleoside 5'-monophosphate[c] '''+''' 1 a tRNA precursor with a 5' extension[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9330]]
+
* Gene: [[Tiso_gene_11613]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11612]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33059 33059]
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15045 15045]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08550 R08550]
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07618 R07618]
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03815 R03815]
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01698 R01698]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P52992 P52992]
 
−
** [http://www.uniprot.org/uniprot/O00087 O00087]
 
−
** [http://www.uniprot.org/uniprot/O17953 O17953]
 
−
** [http://www.uniprot.org/uniprot/O50311 O50311]
 
−
** [http://www.uniprot.org/uniprot/Q41219 Q41219]
 
−
** [http://www.uniprot.org/uniprot/O81413 O81413]
 
−
** [http://www.uniprot.org/uniprot/P75393 P75393]
 
−
** [http://www.uniprot.org/uniprot/Q9I1M1 Q9I1M1]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Q1 Q7M0Q1]
 
−
** [http://www.uniprot.org/uniprot/Q9JZ09 Q9JZ09]
 
−
** [http://www.uniprot.org/uniprot/Q04933 Q04933]
 
−
** [http://www.uniprot.org/uniprot/P31023 P31023]
 
−
** [http://www.uniprot.org/uniprot/P0A0E8 P0A0E8]
 
−
** [http://www.uniprot.org/uniprot/P31046 P31046]
 
−
** [http://www.uniprot.org/uniprot/P11959 P11959]
 
−
** [http://www.uniprot.org/uniprot/Q48419 Q48419]
 
−
** [http://www.uniprot.org/uniprot/P49819 P49819]
 
−
** [http://www.uniprot.org/uniprot/P47513 P47513]
 
−
** [http://www.uniprot.org/uniprot/Q59299 Q59299]
 
−
** [http://www.uniprot.org/uniprot/P43784 P43784]
 
−
** [http://www.uniprot.org/uniprot/Q9JU06 Q9JU06]
 
−
** [http://www.uniprot.org/uniprot/Q60154 Q60154]
 
−
** [http://www.uniprot.org/uniprot/Q9RRG6 Q9RRG6]
 
−
** [http://www.uniprot.org/uniprot/P21880 P21880]
 
−
** [http://www.uniprot.org/uniprot/P09063 P09063]
 
−
** [http://www.uniprot.org/uniprot/P09623 P09623]
 
−
** [http://www.uniprot.org/uniprot/P09622 P09622]
 
−
** [http://www.uniprot.org/uniprot/P0A9P0 P0A9P0]
 
−
** [http://www.uniprot.org/uniprot/P18925 P18925]
 
−
** [http://www.uniprot.org/uniprot/Q9JZP5 Q9JZP5]
 
−
** [http://www.uniprot.org/uniprot/Q58053 Q58053]
 
−
** [http://www.uniprot.org/uniprot/Q59099 Q59099]
 
−
** [http://www.uniprot.org/uniprot/P35484 P35484]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Y3 Q7M0Y3]
 
−
** [http://www.uniprot.org/uniprot/Q9JUT1 Q9JUT1]
 
−
** [http://www.uniprot.org/uniprot/Q9ZD83 Q9ZD83]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Y4 Q7M0Y4]
 
−
** [http://www.uniprot.org/uniprot/Q9JUT5 Q9JUT5]
 
−
** [http://www.uniprot.org/uniprot/Q04829 Q04829]
 
−
** [http://www.uniprot.org/uniprot/P31052 P31052]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Y5 Q7M0Y5]
 
−
** [http://www.uniprot.org/uniprot/P09624 P09624]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.8.1.4}}
+
{{#set: common name=exosome_complex_exonuclease}}
−
{{#set: common name=E3 component of α-ketoacid dehydrogenase complexes|Diaphorase}}
+
{{#set: ec number=EC-3.1.13.1}}
−
{{#set: gene associated=Tiso_gene_9330}}
+
{{#set: gene associated=Tiso_gene_11613|Tiso_gene_11612}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY0-1479}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:10, 21 March 2018

Reaction RXN0-4222

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • exosome_complex_exonuclease
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] => 1 a ribonucleoside 5'-monophosphate[c] + 1 a tRNA precursor with a 5' extension[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1479, tRNA processing: PWY0-1479
    • 4 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-4222&oldid=46527"