Difference between revisions of "AIRS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
+
** [http://enzyme.expasy.org/EC/6.3.3.1 EC-6.3.3.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CADAVERINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD0-1065]][c] '''+''' 1 [[5-METHYLTHIOADENOSINE]][c]
+
** 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 cadaverine[c] '''=>''' 1 H+[c] '''+''' 1 aminopropylcadaverine[c] '''+''' 1 S-methyl-5'-thioadenosine[c]
+
** 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] '''+''' 1 ATP[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17803]]
+
* Gene: [[Tiso_gene_1369]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303]
+
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[orthology-synechocystis]]
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33387 33387]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23032 23032]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08359 R08359]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04208 R04208]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P07244 P07244]
 +
** [http://www.uniprot.org/uniprot/P12043 P12043]
 +
** [http://www.uniprot.org/uniprot/P21872 P21872]
 +
** [http://www.uniprot.org/uniprot/P08178 P08178]
 +
** [http://www.uniprot.org/uniprot/P00967 P00967]
 +
** [http://www.uniprot.org/uniprot/P16340 P16340]
 +
** [http://www.uniprot.org/uniprot/P22102 P22102]
 +
** [http://www.uniprot.org/uniprot/Q57656 Q57656]
 +
** [http://www.uniprot.org/uniprot/O66968 O66968]
 +
** [http://www.uniprot.org/uniprot/Q9JUA2 Q9JUA2]
 +
** [http://www.uniprot.org/uniprot/P43848 P43848]
 +
** [http://www.uniprot.org/uniprot/Q9PME0 Q9PME0]
 +
** [http://www.uniprot.org/uniprot/Q64737 Q64737]
 +
** [http://www.uniprot.org/uniprot/P20772 P20772]
 +
** [http://www.uniprot.org/uniprot/Q55422 Q55422]
 +
** [http://www.uniprot.org/uniprot/P52424 P52424]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.5.1}}
+
{{#set: ec number=EC-6.3.3.1}}
−
{{#set: gene associated=Tiso_gene_17803}}
+
{{#set: gene associated=Tiso_gene_1369}}
−
{{#set: in pathway=PWY0-1303}}
+
{{#set: in pathway=PWY-6121|PWY-6122|PWY-6277}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:11, 21 March 2018

Reaction AIRS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=AIRS-RXN&oldid=46640"