Difference between revisions of "CPD-6224"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** acyl...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-6224 CPD-6224] == * smiles: ** C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-6224 CPD-6224] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)(C)))C([O-])=O)))
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** gibberellin A34
−
** acyl-_synthetase
+
* inchi key:
−
** ORF
+
** InChIKey=IGZIQAJJXGRAJF-OQAXFVLUSA-M
−
** long_chain_acyl-_synthetase
+
* molecular weight:
−
* ec number:
+
** 347.387   
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** GA34
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[CPD-17640]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CPD-17641]][c]
+
* [[RXN-6550]]
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 18-hydroxystearate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 18-hydroxystearoyl-CoA[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_348]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4191]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_7855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
+
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIPID_MAPS : LMPR0104170025
−
{{#set: common name=polyketide_synthase}}
+
* PUBCHEM:
−
{{#set: common name=acyl-_synthetase}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245079 25245079]
−
{{#set: common name=ORF}}
+
* CHEBI:
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29593 29593]
−
{{#set: ec number=EC-6.2.1.3}}
+
* LIGAND-CPD:
−
{{#set: gene associated=Tiso_gene_348|Tiso_gene_500|Tiso_gene_4191|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_9394|Tiso_gene_7855|Tiso_gene_136}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C11868 C11868]
−
{{#set: in pathway=PWY-6733}}
+
{{#set: smiles=C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)(C)))C([O-])=O)))}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=gibberellin A34}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: inchi key=InChIKey=IGZIQAJJXGRAJF-OQAXFVLUSA-M}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: molecular weight=347.387    }}
 +
{{#set: common name=GA34}}
 +
{{#set: produced by=RXN-6550}}

Latest revision as of 20:11, 21 March 2018

Metabolite CPD-6224

  • smiles:
    • C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)(C)))C([O-])=O)))
  • common name:
    • gibberellin A34
  • inchi key:
    • InChIKey=IGZIQAJJXGRAJF-OQAXFVLUSA-M
  • molecular weight:
    • 347.387
  • Synonym(s):
    • GA34

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)(C)))C([O-])=O)))" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-6224&oldid=46647"