Difference between revisions of "RXN-2006"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOSULFATE-SULFURTRANSFERASE-RXN THIOSULFATE-SULFURTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOSULFATE-SULFURTRANSFERASE-RXN THIOSULFATE-SULFURTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** sulfurtransferase
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/2.8.1.1 EC-2.8.1.1]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HCN]][c] '''+''' 1 [[S2O3]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[HSCN]][c] '''+''' 1 [[SO3]][c]
+
** 1 [[CPD-514]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[BENZOYLCOA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 hydrogen cyanide[c] '''+''' 1 thiosulfate[c] '''=>''' 2 H+[c] '''+''' 1 thiocyanate[c] '''+''' 1 sulfite[c]
+
** 1 3-oxo-3-phenylpropanoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 benzoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13465]]
+
* Gene: [[Tiso_gene_16181]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-athaliana]]
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***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_12589]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5838]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5350]], thiosulfate disproportionation IV (rhodanese): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5350 PWY-5350]
+
* [[P281-PWY]], 3-phenylpropanoate degradation: [http://metacyc.org/META/NEW-IMAGE?object=P281-PWY P281-PWY]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-481]], ethylbenzene degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-481 PWY-481]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6458]], benzoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6458 PWY-6458]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6443]], benzoate biosynthesis I (CoA-dependent, β-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16881 16881]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01931 R01931]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05506 R05506]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P25324 P25324]
+
−
** [http://www.uniprot.org/uniprot/P52196 P52196]
+
−
** [http://www.uniprot.org/uniprot/Q16762 Q16762]
+
−
** [http://www.uniprot.org/uniprot/P00586 P00586]
+
−
** [http://www.uniprot.org/uniprot/P25325 P25325]
+
−
** [http://www.uniprot.org/uniprot/P24329 P24329]
+
−
** [http://www.uniprot.org/uniprot/P52197 P52197]
+
−
** [http://www.uniprot.org/uniprot/O64530 O64530]
+
−
** [http://www.uniprot.org/uniprot/O50573 O50573]
+
−
** [http://www.uniprot.org/uniprot/Q9M4F7 Q9M4F7]
+
−
** [http://www.uniprot.org/uniprot/Q9SCY8 Q9SCY8]
+
−
** [http://www.uniprot.org/uniprot/Q9S7Y9 Q9S7Y9]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=sulfurtransferase}}
+
{{#set: gene associated=Tiso_gene_16181}}
−
{{#set: ec number=EC-2.8.1.1}}
+
{{#set: in pathway=P281-PWY|PWY-481|PWY-6458|PWY-6443}}
−
{{#set: gene associated=Tiso_gene_13465|Tiso_gene_12589|Tiso_gene_5838}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=PWY-5350}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:11, 21 March 2018

Reaction RXN-2006

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-3-phenylpropanoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 benzoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P281-PWY, 3-phenylpropanoate degradation: P281-PWY
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-481, ethylbenzene degradation (anaerobic): PWY-481
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6458, benzoyl-CoA biosynthesis: PWY-6458
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6443, benzoate biosynthesis I (CoA-dependent, β-oxidative): PWY-6443
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-2006&oldid=46655"