Difference between revisions of "URPHOS-RXN"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=trans-D2-cis-cis-D9-27-C46-3-ACPs trans-D2-cis-cis-D9-27-C46-3-ACPs] == * common name: ** a tra...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] == * direction: ** REVERSIBLE * common name: ** uridine_phosphorylase * ec n...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] == |
| + | * direction: | ||
| + | ** REVERSIBLE | ||
* common name: | * common name: | ||
| − | ** | + | ** uridine_phosphorylase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2] | ||
| + | ** [http://enzyme.expasy.org/EC/2.4.2.3 EC-2.4.2.3] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[URACIL]][c] '''+''' 1 [[RIBOSE-1P]][c] |
| − | == | + | * With common name(s): |
| + | ** 1 phosphate[c] '''+''' 1 uridine[c] '''<=>''' 1 uracil[c] '''+''' 1 α-D-ribose-1-phosphate[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_20384]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[PWY-5532]], nucleoside and nucleotide degradation (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5532 PWY-5532] | ||
| + | ** '''3''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24388 24388] |
| − | {{#set: | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01876 R01876] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P52624 P52624] | ||
| + | ** [http://www.uniprot.org/uniprot/P43770 P43770] | ||
| + | ** [http://www.uniprot.org/uniprot/Q16831 Q16831] | ||
| + | ** [http://www.uniprot.org/uniprot/P12758 P12758] | ||
| + | ** [http://www.uniprot.org/uniprot/P19662 P19662] | ||
| + | ** [http://www.uniprot.org/uniprot/O08444 O08444] | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=uridine_phosphorylase}} | ||
| + | {{#set: ec number=EC-2.4.2.2}} | ||
| + | {{#set: ec number=EC-2.4.2.3}} | ||
| + | {{#set: gene associated=Tiso_gene_20384}} | ||
| + | {{#set: in pathway=PWY-5532|PWY0-1295}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:12, 21 March 2018
Contents
Reaction URPHOS-RXN
- direction:
- REVERSIBLE
- common name:
- uridine_phosphorylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 phosphate[c] + 1 uridine[c] <=> 1 uracil[c] + 1 α-D-ribose-1-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_20384
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-5532, nucleoside and nucleotide degradation (archaea): PWY-5532
- 3 reactions found over 10 reactions in the full pathway
- PWY0-1295, pyrimidine ribonucleosides degradation: PWY0-1295
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
