Difference between revisions of "Tiso gene 3052"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] == * direction: ** LEFT-TO-RIGHT * common name: ** methylenetetrahydrofolate_red...")
 
(Created page with "Category:Gene == Gene Tiso_gene_3052 == * right end position: ** 12016 * transcription direction: ** POSITIVE * left end position: ** 9007 * centisome position: ** 51.0427...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] ==
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== Gene Tiso_gene_3052 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 12016
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* common name:
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* transcription direction:
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** methylenetetrahydrofolate_reductase (ferredoxin)
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.5.7.1 EC-1.5.7.1]
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** 9007
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* centisome position:
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** 51.04273   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.3.66-RXN]]
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** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c]
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* Reaction: [[RXN-10959]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10960]]
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* [[Tiso_gene_4806]]
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** Source: [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-6368]]
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
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** '''7''' reactions found over '''12''' reactions in the full pathway
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=12016}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01217 R01217]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=9007}}
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{{#set: common name=methylenetetrahydrofolate_reductase (ferredoxin)}}
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{{#set: centisome position=51.04273    }}
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{{#set: ec number=EC-1.5.7.1}}
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{{#set: reaction associated=3.1.3.66-RXN|RXN-10959|RXN-10960}}
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{{#set: gene associated=Tiso_gene_4806}}
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{{#set: pathway associated=PWY-6368}}
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{{#set: in pathway=PWY-2201|CODH-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Latest revision as of 19:30, 21 March 2018

Gene Tiso_gene_3052

  • right end position:
    • 12016
  • transcription direction:
    • POSITIVE
  • left end position:
    • 9007
  • centisome position:
    • 51.04273
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3052&oldid=42031"