Difference between revisions of "Tiso gene 4685"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBON-DIOXIDE CARBON-DIOXIDE] == * smiles: ** C(=O)=O * inchi key: ** InChIKey=CURLTUGMZLYLDI-...")
(Created page with "Category:Gene == Gene Tiso_gene_4685 == * right end position: ** 8084 * transcription direction: ** POSITIVE * left end position: ** 2619 * centisome position: ** 18.03346...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBON-DIOXIDE CARBON-DIOXIDE] ==
+
== Gene Tiso_gene_4685 ==
* smiles:
+
* right end position:
** C(=O)=O
+
** 8084
* inchi key:
+
* transcription direction:
** InChIKey=CURLTUGMZLYLDI-UHFFFAOYSA-N
+
** POSITIVE
* common name:
+
* left end position:
** CO2
+
** 2619
* molecular weight:
+
* centisome position:
** 44.01    
+
** 18.033464    
 
* Synonym(s):
 
* Synonym(s):
** carbonic anhydride
 
** carbonic acid gas
 
** carbon dioxide
 
  
== Reaction(s) known to consume the compound ==
+
== Reactions associated ==
* [[DETHIOBIOTIN-SYN-RXN]]
+
* Reaction: [[6.3.4.16-RXN]]
* [[TransportSeed_CARBON-DIOXIDE]]
+
** Source: [[orthology-esiliculosus]]
* [[AIRCARBOXY-RXN]]
+
* Reaction: [[CARBPSYN-RXN]]
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
+
** Source: [[annotation-experimental_annotation]]
* [[6.3.4.16-RXN]]
+
*** Assignment: automated-name-match
== Reaction(s) known to produce the compound ==
+
** Source: [[orthology-esiliculosus]]
* [[RXN-16615]]
+
* Reaction: [[GLUTAMIN-RXN]]
* [[R524-RXN]]
+
** Source: [[annotation-experimental_annotation]]
* [[RXN-18201]]
+
*** Assignment: automated-name-match
* [[RXN-18203]]
+
** Source: [[orthology-esiliculosus]]
* [[RXN-18205]]
+
* Reaction: [[RXN-13202]]
* [[RXN-10828]]
+
** Source: [[annotation-in-silico_annotation]]
* [[RXN-18207]]
+
*** Assignment: ec-number
* [[RXN-18209]]
+
** Source: [[annotation-experimental_annotation]]
* [[PREPHENATEDEHYDROG-RXN]]
+
*** Assignment: ec-number
* [[RXN-6081]]
+
** Source: [[orthology-esiliculosus]]
* [[2.3.1.179-RXN]]
+
* Reaction: [[RXN-14196]]
* [[RXN1G-324]]
+
** Source: [[annotation-in-silico_annotation]]
* [[RXN-7785]]
+
*** Assignment: ec-number
* [[SAMDECARB-RXN]]
+
** Source: [[annotation-experimental_annotation]]
* [[RXN-3142]]
+
*** Assignment: ec-number
* [[THREOSPON-RXN]]
+
* Reaction: [[RXN-16909]]
* [[1.14.11.2-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
* [[OXALATE-DECARBOXYLASE-RXN]]
+
*** Assignment: ec-number
* [[FATTY-ACYL-COA-SYNTHASE-RXN]]
+
** Source: [[annotation-experimental_annotation]]
* [[RXN1G-218]]
+
*** Assignment: ec-number
* [[RXN-18211]]
+
* Reaction: [[RXN-16910]]
* [[RXN-12893]]
+
** Source: [[annotation-in-silico_annotation]]
* [[RXN0-2141]]
+
*** Assignment: ec-number
* [[1.14.11.19-RXN]]
+
** Source: [[annotation-experimental_annotation]]
* [[LEUCPEL-RXN]]
+
*** Assignment: ec-number
* [[RXN-13158]]
+
== Pathways associated ==
* [[RXNQT-4168]]
+
* [[PWY-4984]]
* [[R06858]]
+
* [[GLUTAMINDEG-PWY]]
* [[RXN0-1461]]
+
* [[ARGSYN-PWY]]
* [[TransportSeed_CARBON-DIOXIDE]]
+
* [[PWY-5154]]
* [[RXN1G-840]]
+
* [[PWY-7400]]
* [[AMCL]]
+
* [[ARGSYNBSUB-PWY]]
* [[PEPCARBOXYKIN-RXN]]
+
* [[PWY-7693]]
* [[RXN-9539]]
+
* [[PWY-7790]]
* [[RXN-9535]]
+
* [[PWY-7791]]
* [[RXN-6201]]
+
* [[PWY-5686]]
* [[ORNDECARBOX-RXN]]
+
* [[CITRULBIO-PWY]]
* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
+
* [[RXN-14249]]
+
* [[ACETOOHBUTSYN-RXN]]
+
* [[RXN1G-445]]
+
* [[RXN-7648]]
+
* [[HPPD]]
+
* [[P-PANTOCYSDECARB-RXN]]
+
* [[RXN66-23]]
+
* [[KETOISOCAPROATE-RXN]]
+
* [[RXN1G-368]]
+
* [[2.3.1.165-RXN]]
+
* [[RXN-8391]]
+
* [[RXN490-3641]]
+
* [[RXN-13322]]
+
* [[RXN-9632]]
+
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
+
* [[RXN-9523]]
+
* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
+
* [[RXN-9527]]
+
* [[RXN1G-236]]
+
* [[RXN-9952]]
+
* [[RXN-7800]]
+
* [[ACETOLACTSYN-RXN]]
+
* [[RXN-10815]]
+
* [[R468-RXN]]
+
* [[RXN-9648]]
+
* [[MALONYL-COA-DECARBOXYLASE-RXN]]
+
* [[orDCh]]
+
* [[RXN1G-26]]
+
* [[2-KETO-ADIPATE-DEHYDROG-RXN]]
+
* [[RXN-7775]]
+
* [[OXALODECARB-RXN]]
+
* [[RXN-13431]]
+
* [[RXN-16082]]
+
* [[RXN0-5222]]
+
* [[QUINOPRIBOTRANS-RXN]]
+
* [[7KAPSYN-RXN]]
+
* [[RXN1G-306]]
+
* [[MALIC-NADP-RXN]]
+
* [[TYROSINE-DECARBOXYLASE-RXN]]
+
* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
+
* [[RXN-16001]]
+
* [[RXN-9654]]
+
* [[RXNQT-4171]]
+
* [[RXN-113]]
+
* [[6PGLUCONDEHYDROG-RXN]]
+
* [[RXN-14972]]
+
* [[RXNQT-4178]]
+
* [[RXN-115]]
+
* [[ACETOACETATE-DECARBOXYLASE-RXN]]
+
* [[RXNQT-4174]]
+
* [[RXN-9531]]
+
* [[RXN-9653]]
+
* [[RXN-9652]]
+
* [[RXN-9651]]
+
* [[RXN-9650]]
+
* [[PYRUVDEH-RXN]]
+
* [[HEMN-RXN]]
+
* [[RXN-9543]]
+
* [[2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN]]
+
* [[orDC]]
+
* [[RXN-10658]]
+
* [[NARINGENIN-3-DIOXYGENASE-RXN]]
+
* [[RXN-16629]]
+
* [[RXN-11403]]
+
* [[RXN-10654]]
+
* [[RXN-16094]]
+
* [[RXN-16621]]
+
* [[RXN66-470]]
+
* [[RXN-16625]]
+
* [[2OXOGLUTDECARB-RXN]]
+
* [[RXN-13296]]
+
* [[RXN-13295]]
+
* [[RXN-13294]]
+
* [[RXN-602]]
+
* [[1.1.1.39-RXN]]
+
* [[RXN-16017]]
+
* [[RXN-2902]]
+
* [[RXN1G-499]]
+
* [[RXN1G-1003]]
+
* [[RXN-12610]]
+
* [[RXN-12611]]
+
* [[IGPSYN-RXN]]
+
* [[RXNQT-4165]]
+
* [[RXN66-18]]
+
* [[PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN]]
+
* [[RXN1G-138]]
+
* [[RXN1F-93]]
+
* [[RXN0-1134]]
+
* [[RXN-6550]]
+
* [[1.14.11.18-RXN]]
+
* [[1.2.1.25-RXN]]
+
* [[GLUTDECARBOX-RXN]]
+
* [[RXN-11474]]
+
* [[ARGININE-2-MONOOXYGENASE-RXN]]
+
* [[RXN0-299]]
+
* [[PHOSPHASERDECARB-RXN]]
+
* [[RXN-11479]]
+
* [[FTHFO]]
+
* [[RXN-12583]]
+
* [[DIAMINOPIMDECARB-RXN]]
+
* [[RXN1G-132]]
+
* [[RXN-527]]
+
* [[DXS-RXN]]
+
* [[OROTPDECARB-RXN]]
+
* [[2.3.1.180-RXN]]
+
* [[UROGENDECARBOX-RXN]]
+
* [[RXN-11484]]
+
* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
+
* [[FATTY-ACID-PEROXIDASE-RXN]]
+
* [[RXN-13442]]
+
* [[RXN-171]]
+
* [[RXN-8450]]
+
* [[RXN-13441]]
+
* [[RXN1F-169]]
+
* [[RXN-5641]]
+
* [[RXN-7745]]
+
* [[RXN-10059]]
+
* [[RXN-7697]]
+
* [[RXN-2541]]
+
* [[RXN-7922]]
+
* [[orPDC]]
+
* [[ASPDECARBOX-RXN]]
+
* [[RXN66-313]]
+
* [[RXN1F-165]]
+
* [[LYSDECARBOX-RXN]]
+
* [[RXN66-318]]
+
* [[3-OXOACYL-ACP-SYNTH-RXN]]
+
* [[2.5.1.64-RXN]]
+
* [[RXN-14986]]
+
* [[RXN3O-1803]]
+
* [[RXN1F-168]]
+
* [[RXN1F-162]]
+
* [[RXN-13297]]
+
* [[UGDC]]
+
* [[RXN1F-167]]
+
* [[RXN-9516]]
+
* [[RXN1F-163]]
+
== Reaction(s) of unknown directionality ==
+
* [[ISOCITDEH-RXN]]
+
* [[RXN0-5224]]
+
* [[RXN1G-460]]
+
* [[2.3.1.41-RXN]]
+
* [[2.7.8.23-RXN]]
+
* [[ExchangeSeed_CARBON-DIOXIDE]]
+
* [[GCVP-RXN]]
+
* [[CARBODEHYDRAT-RXN]]
+
* [[RXN-10642]]
+
* [[METHYLVALERATE-RXN]]
+
* [[1.1.1.170-RXN]]
+
* [[UREASE-RXN]]
+
* [[RXN-8642]]
+
* [[1.2.4.4-RXN]]
+
* [[2KETO-3METHYLVALERATE-RXN]]
+
* [[RXN-13926]]
+
* [[PREPHENATEDEHYDRAT-RXN]]
+
* [[CARBAMATE-KINASE-RXN]]
+
 
== External links  ==
 
== External links  ==
* UM-BBD-CPD : c0131
+
{{#set: right end position=8084}}
* CAS : 124-38-9
+
{{#set: transcription direction=POSITIVE}}
* METABOLIGHTS : MTBLC16526
+
{{#set: left end position=2619}}
* PUBCHEM:
+
{{#set: centisome position=18.033464   }}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=280 280]
+
{{#set: reaction associated=6.3.4.16-RXN|CARBPSYN-RXN|GLUTAMIN-RXN|RXN-13202|RXN-14196|RXN-16909|RXN-16910}}
* HMDB : HMDB01967
+
{{#set: pathway associated=PWY-4984|GLUTAMINDEG-PWY|ARGSYN-PWY|PWY-5154|PWY-7400|ARGSYNBSUB-PWY|PWY-7693|PWY-7790|PWY-7791|PWY-5686|CITRULBIO-PWY}}
* LIGAND-CPD:
+
** [http://www.genome.jp/dbget-bin/www_bget?C00011 C00011]
+
* CHEMSPIDER:
+
** [http://www.chemspider.com/Chemical-Structure.274.html 274]
+
* CHEBI:
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16526 16526]
+
* BIGG : co2
+
{{#set: smiles=C(=O)=O}}
+
{{#set: inchi key=InChIKey=CURLTUGMZLYLDI-UHFFFAOYSA-N}}
+
{{#set: common name=CO2}}
+
{{#set: molecular weight=44.01   }}
+
{{#set: common name=carbonic anhydride|carbonic acid gas|carbon dioxide}}
+
{{#set: consumed by=DETHIOBIOTIN-SYN-RXN|TransportSeed_CARBON-DIOXIDE|AIRCARBOXY-RXN|RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN|6.3.4.16-RXN}}
+
{{#set: produced by=RXN-16615|R524-RXN|RXN-18201|RXN-18203|RXN-18205|RXN-10828|RXN-18207|RXN-18209|PREPHENATEDEHYDROG-RXN|RXN-6081|2.3.1.179-RXN|RXN1G-324|RXN-7785|SAMDECARB-RXN|RXN-3142|THREOSPON-RXN|1.14.11.2-RXN|OXALATE-DECARBOXYLASE-RXN|FATTY-ACYL-COA-SYNTHASE-RXN|RXN1G-218|RXN-18211|RXN-12893|RXN0-2141|1.14.11.19-RXN|LEUCPEL-RXN|RXN-13158|RXNQT-4168|R06858|RXN0-1461|TransportSeed_CARBON-DIOXIDE|RXN1G-840|AMCL|PEPCARBOXYKIN-RXN|RXN-9539|RXN-9535|RXN-6201|ORNDECARBOX-RXN|UDP-GLUCURONATE-DECARBOXYLASE-RXN|RXN-14249|ACETOOHBUTSYN-RXN|RXN1G-445|RXN-7648|HPPD|P-PANTOCYSDECARB-RXN|RXN66-23|KETOISOCAPROATE-RXN|RXN1G-368|2.3.1.165-RXN|RXN-8391|RXN490-3641|RXN-13322|RXN-9632|SERINE-C-PALMITOYLTRANSFERASE-RXN|RXN-9523|DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN|RXN-9527|RXN1G-236|RXN-9952|RXN-7800|ACETOLACTSYN-RXN|RXN-10815|R468-RXN|RXN-9648|MALONYL-COA-DECARBOXYLASE-RXN|orDCh|RXN1G-26|2-KETO-ADIPATE-DEHYDROG-RXN|RXN-7775|OXALODECARB-RXN|RXN-13431|RXN-16082|RXN0-5222|QUINOPRIBOTRANS-RXN|7KAPSYN-RXN|RXN1G-306|MALIC-NADP-RXN|TYROSINE-DECARBOXYLASE-RXN|4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN|RXN-16001|RXN-9654|RXNQT-4171|RXN-113|6PGLUCONDEHYDROG-RXN|RXN-14972|RXNQT-4178|RXN-115|ACETOACETATE-DECARBOXYLASE-RXN|RXNQT-4174|RXN-9531|RXN-9653|RXN-9652|RXN-9651|RXN-9650|PYRUVDEH-RXN|HEMN-RXN|RXN-9543|2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN|orDC|RXN-10658|NARINGENIN-3-DIOXYGENASE-RXN|RXN-16629|RXN-11403|RXN-10654|RXN-16094|RXN-16621|RXN66-470|RXN-16625|2OXOGLUTDECARB-RXN|RXN-13296|RXN-13295|RXN-13294|RXN-602|1.1.1.39-RXN|RXN-16017|RXN-2902|RXN1G-499|RXN1G-1003|RXN-12610|RXN-12611|IGPSYN-RXN|RXNQT-4165|RXN66-18|PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN|RXN1G-138|RXN1F-93|RXN0-1134|RXN-6550|1.14.11.18-RXN|1.2.1.25-RXN|GLUTDECARBOX-RXN|RXN-11474|ARGININE-2-MONOOXYGENASE-RXN|RXN0-299|PHOSPHASERDECARB-RXN|RXN-11479|FTHFO|RXN-12583|DIAMINOPIMDECARB-RXN|RXN1G-132|RXN-527|DXS-RXN|OROTPDECARB-RXN|2.3.1.180-RXN|UROGENDECARBOX-RXN|RXN-11484|3-OXOACYL-ACP-SYNTH-BASE-RXN|FATTY-ACID-PEROXIDASE-RXN|RXN-13442|RXN-171|RXN-8450|RXN-13441|RXN1F-169|RXN-5641|RXN-7745|RXN-10059|RXN-7697|RXN-2541|RXN-7922|orPDC|ASPDECARBOX-RXN|RXN66-313|RXN1F-165|LYSDECARBOX-RXN|RXN66-318|3-OXOACYL-ACP-SYNTH-RXN|2.5.1.64-RXN|RXN-14986|RXN3O-1803|RXN1F-168|RXN1F-162|RXN-13297|UGDC|RXN1F-167|RXN-9516|RXN1F-163}}
+
{{#set: reversible reaction associated=ISOCITDEH-RXN|RXN0-5224|RXN1G-460|2.3.1.41-RXN|2.7.8.23-RXN|ExchangeSeed_CARBON-DIOXIDE|GCVP-RXN|CARBODEHYDRAT-RXN|RXN-10642|METHYLVALERATE-RXN|1.1.1.170-RXN|UREASE-RXN|RXN-8642|1.2.4.4-RXN|2KETO-3METHYLVALERATE-RXN|RXN-13926|PREPHENATEDEHYDRAT-RXN|CARBAMATE-KINASE-RXN}}
+

Latest revision as of 20:12, 21 March 2018

Gene Tiso_gene_4685

  • right end position:
    • 8084
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2619
  • centisome position:
    • 18.033464
  • Synonym(s):

Reactions associated

Pathways associated

External links