Difference between revisions of "4.2.1.59-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-Cysteine-Desulfurase-persulfide L-Cysteine-Desulfurase-persulfide] == * common name: ** an [L...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.59-RXN 4.2.1.59-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase *...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-Cysteine-Desulfurase-persulfide L-Cysteine-Desulfurase-persulfide] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.59-RXN 4.2.1.59-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** an [L-cysteine desulfurase] L-cysteine persulfide
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** polyketide_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14382]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[3-Hydroxy-octanoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2-Octenoyl-ACPs]][c]
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* [[RXN0-308]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a (3R)-3-hydroxyoctanoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans oct-2-enoyl-[acp][c]
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* [[RXN-12587]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6885]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_6884]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=an [L-cysteine desulfurase] L-cysteine persulfide}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: consumed by=RXN-14382}}
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{{#set: common name=polyketide_synthase}}
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{{#set: produced by=RXN0-308}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: reversible reaction associated=RXN-12587}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: gene associated=Tiso_gene_136|Tiso_gene_135|Tiso_gene_500|Tiso_gene_6885|Tiso_gene_6884|Tiso_gene_10876|Tiso_gene_13394}}
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{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:13, 21 March 2018

Reaction 4.2.1.59-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=4.2.1.59-RXN&oldid=46966"