Difference between revisions of "PSERTRANSAM-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-I-CIT HOMO-I-CIT] == * smiles: ** C(CC(=O)[O-])C(C(=O)[O-])C(O)C(=O)[O-] * inchi key: ** I...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAM-RXN PSERTRANSAM-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** phosphoseri...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-I-CIT HOMO-I-CIT] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAM-RXN PSERTRANSAM-RXN] ==
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* smiles:
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* direction:
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** C(CC(=O)[O-])C(C(=O)[O-])C(O)C(=O)[O-]
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** REVERSIBLE
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* inchi key:
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** InChIKey=OEJZZCGRGVFWHK-WVZVXSGGSA-K
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* common name:
 
* common name:
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** (1R,2S)-homoisocitrate
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** ORF
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* molecular weight:
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** phosphoserine_aminotransferase
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** 203.128   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
 
* Synonym(s):
 
* Synonym(s):
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** (-)-threo-isohomocitrate
 
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** (-)-1-hydroxy-1,2,4-butanetricarboxylate
 
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** homo-I-cit
 
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** 1-hydroxy-1,2,4-butanetricarboxylate
 
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** 2-hydroxy-3-carboxyadipate
 
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** homo-iso-citrate
 
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** 1-(R)-hydroxy-2-(S)-1,2,4-butanetricarboxylic acid
 
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** 1-hydroxybutane-1,2,4-tricarboxylate
 
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** (1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
 
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** homoisocitrate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[3-P-SERINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[3-P-HYDROXYPYRUVATE]][c]
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* [[HOMOACONITATE-HYDRATASE-RXN]]
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* With common name(s):
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* [[RXN-13722]]
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** 1 3-phospho-L-serine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 3-phospho-hydroxypyruvate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_17123]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_15686]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5459812 5459812]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14329 14329]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.4573580.html 4573580]
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** [http://www.genome.jp/dbget-bin/www_bget?R04173 R04173]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15404 15404]
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** [http://www.uniprot.org/uniprot/P10658 P10658]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P23721 P23721]
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** [http://www.genome.jp/dbget-bin/www_bget?C05662 C05662]
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** [http://www.uniprot.org/uniprot/Q9PIH3 Q9PIH3]
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{{#set: smiles=C(CC(=O)[O-])C(C(=O)[O-])C(O)C(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/Q9CHW5 Q9CHW5]
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{{#set: inchi key=InChIKey=OEJZZCGRGVFWHK-WVZVXSGGSA-K}}
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** [http://www.uniprot.org/uniprot/P44336 P44336]
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{{#set: common name=(1R,2S)-homoisocitrate}}
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** [http://www.uniprot.org/uniprot/O34370 O34370]
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{{#set: molecular weight=203.128    }}
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** [http://www.uniprot.org/uniprot/P62676 P62676]
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{{#set: common name=(-)-threo-isohomocitrate|(-)-1-hydroxy-1,2,4-butanetricarboxylate|homo-I-cit|1-hydroxy-1,2,4-butanetricarboxylate|2-hydroxy-3-carboxyadipate|homo-iso-citrate|1-(R)-hydroxy-2-(S)-1,2,4-butanetricarboxylic acid|1-hydroxybutane-1,2,4-tricarboxylate|(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate|homoisocitrate}}
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** [http://www.uniprot.org/uniprot/P33330 P33330]
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{{#set: reversible reaction associated=HOMOACONITATE-HYDRATASE-RXN|RXN-13722}}
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** [http://www.uniprot.org/uniprot/P19689 P19689]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ORF}}
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{{#set: common name=phosphoserine_aminotransferase}}
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{{#set: ec number=EC-2.6.1.52}}
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{{#set: gene associated=Tiso_gene_17123|Tiso_gene_15686}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:13, 21 March 2018

Reaction PSERTRANSAM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • phosphoserine_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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