Difference between revisions of "RXN-16133"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKBLIG-RXN AKBLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glycine_c-acetyltransfera...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16133 RXN-16133] == * direction: ** REVERSIBLE * common name: ** 3-hydroxyacyl-_dehydrogenase *...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKBLIG-RXN AKBLIG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16133 RXN-16133] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** glycine_c-acetyltransferase
+
** 3-hydroxyacyl-_dehydrogenase
 +
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
 +
** hydroxyacyl-coenzyme_a_mitochondrial
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.29 EC-2.3.1.29]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[AMINO-OXOBUT]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[L-3-HYDROXYACYL-COA]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 L-2-amino-3-oxobutanoate[c] '''=>''' 1 glycine[c] '''+''' 1 acetyl-CoA[c]
+
** 1 a (3S)-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''<=>''' 1 a 3-oxoacyl-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3555]]
+
* Gene: [[Tiso_gene_18838]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14262]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18839]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14026]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5857]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[THREONINE-DEG2-PWY]], L-threonine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=THREONINE-DEG2-PWY THREONINE-DEG2-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20736 20736]
+
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
−
* LIGAND-RXN:
+
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00371 R00371]
+
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00370 R00370]
+
{{#set: ec number=EC-1.1.1.35}}
−
* UNIPROT:
+
{{#set: gene associated=Tiso_gene_18838|Tiso_gene_14262|Tiso_gene_18839|Tiso_gene_14026|Tiso_gene_5857}}
−
** [http://www.uniprot.org/uniprot/Q9RRY6 Q9RRY6]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/O58030 O58030]
+
−
** [http://www.uniprot.org/uniprot/Q9UY32 Q9UY32]
+
−
** [http://www.uniprot.org/uniprot/O31777 O31777]
+
−
** [http://www.uniprot.org/uniprot/Q22768 Q22768]
+
−
** [http://www.uniprot.org/uniprot/P0AB77 P0AB77]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=glycine_c-acetyltransferase}}
+
−
{{#set: ec number=EC-2.3.1.29}}
+
−
{{#set: gene associated=Tiso_gene_3555}}
+
−
{{#set: in pathway=THREONINE-DEG2-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:06, 21 March 2018

Reaction RXN-16133

  • direction:
    • REVERSIBLE
  • common name:
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16133&oldid=39542"