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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE--TRNA-LIGASE-RXN SERINE--TRNA-LIGASE-RXN] == | + | == Gene Tiso_gene_14059 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** ORF
| + | |
| − | ** structural_maintenance_of_chromosomes_protein_6
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.11 EC-6.1.1.11]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[RXN-8443]] |
| − | ** 1 [[SER]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[SER-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-SER-tRNAs]][c] '''+''' 1 [[AMP]][c]
| + | ** Source: [[orthology-athaliana]] |
| − | * With common name(s): | + | |
| − | ** 1 L-serine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAser[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-seryl-[tRNAser][c] '''+''' 1 AMP[c] | + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_1682]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_10015]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_1684]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_587]]
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
| + | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| | ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
| − | *** Tool: [[pantograph]]
| + | == Pathways associated == |
| − | * Category: [[annotation]] | + | * [[PWY-5381]] |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=RXN-8443}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12292 12292]
| + | {{#set: pathway associated=PWY-5381}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03662 R03662]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZCG5 Q9ZCG5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O51244 O51244]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O66647 O66647]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PIB3 Q9PIB3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58477 Q58477]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O27194 O27194]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84734 O84734]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X199 Q9X199]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P47251 P47251]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JT77 Q9JT77]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O83653 O83653]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z736 Q9Z736]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P49591 P49591]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P56458 P56458]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZJD9 Q9ZJD9]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CEX2 Q9CEX2]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43833 P43833]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P26636 P26636]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P39919 P39919]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P37464 P37464]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q39230 Q39230]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P75107 P75107]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P73201 P73201]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O82108 O82108]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O82110 O82110]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O81983 O81983]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O45887 O45887]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O14018 O14018]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P54221 P54221]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07284 P07284]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A8L1 P0A8L1]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: common name=structural_maintenance_of_chromosomes_protein_6}}
| + | |
| − | {{#set: ec number=EC-6.1.1.11}}
| + | |
| − | {{#set: gene associated=Tiso_gene_1682|Tiso_gene_10015|Tiso_gene_1684|Tiso_gene_587}}
| + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
