Difference between revisions of "RXN0-901"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8032 RXN-8032] == * direction: ** REVERSIBLE * common name: ** 3-ketopimelyl-CoA thiolase * ec...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-901 RXN0-901] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.17....") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-901 RXN0-901] == |
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
− | |||
− | |||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[XANTHINE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[URATE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 xanthine[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 urate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[Tiso_gene_11775]] |
− | ** [[ | + | ** Source: [[orthology-athaliana]] |
− | + | ||
== Pathways == | == Pathways == | ||
− | * [[ | + | * [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607] |
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] | ||
+ | ** '''4''' reactions found over '''17''' reactions in the full pathway | ||
+ | * [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596] | ||
+ | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497] | ||
+ | ** '''7''' reactions found over '''24''' reactions in the full pathway | ||
+ | * [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999] | ||
+ | ** '''2''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538] | ||
** '''2''' reactions found over '''7''' reactions in the full pathway | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
− | |||
− | |||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-athaliana]] | ** Source: [[orthology-athaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
− | ** Source: [[ | + | * Category: [[annotation]] |
− | *** Tool: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16669 16669] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02103 R02103] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q62637 Q62637] | ||
+ | ** [http://www.uniprot.org/uniprot/P22811 P22811] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12553 Q12553] | ||
+ | ** [http://www.uniprot.org/uniprot/P08793 P08793] | ||
+ | ** [http://www.uniprot.org/uniprot/P10351 P10351] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0I7 Q7M0I7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0I8 Q7M0I8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0I9 Q7M0I9] | ||
+ | ** [http://www.uniprot.org/uniprot/P47990 P47990] | ||
+ | ** [http://www.uniprot.org/uniprot/P47989 P47989] | ||
+ | ** [http://www.uniprot.org/uniprot/Q00519 Q00519] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
− | + | {{#set: ec number=EC-1.17.1.4}} | |
− | {{#set: ec number=EC- | + | {{#set: gene associated=Tiso_gene_11775}} |
− | {{#set: gene associated= | + | {{#set: in pathway=PWY-6607|SALVADEHYPOX-PWY|P164-PWY|PWY-6596|PWY-5497|PWY-6606|PWY-6999|PWY-6608|PWY-5695|PWY-6538}} |
− | {{#set: in pathway= | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}} |
− | {{#set: reconstruction source=orthology-athaliana| | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
− | {{#set: reconstruction tool=pantograph}} | + |
Latest revision as of 20:17, 21 March 2018
Contents
Reaction RXN0-901
- direction:
- REVERSIBLE
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 H2O[c] + 1 NAD+[c] + 1 xanthine[c] <=> 1 H+[c] + 1 NADH[c] + 1 urate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11775
- Source: orthology-athaliana
Pathways
- PWY-6607, guanosine nucleotides degradation I: PWY-6607
- 3 reactions found over 4 reactions in the full pathway
- SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
- 5 reactions found over 5 reactions in the full pathway
- P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
- 4 reactions found over 17 reactions in the full pathway
- PWY-6596, adenosine nucleotides degradation I: PWY-6596
- 8 reactions found over 8 reactions in the full pathway
- PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
- 7 reactions found over 24 reactions in the full pathway
- PWY-6606, guanosine nucleotides degradation II: PWY-6606
- 4 reactions found over 4 reactions in the full pathway
- PWY-6999, theophylline degradation: PWY-6999
- 2 reactions found over 9 reactions in the full pathway
- PWY-6608, guanosine nucleotides degradation III: PWY-6608
- 3 reactions found over 4 reactions in the full pathway
- PWY-5695, urate biosynthesis/inosine 5'-phosphate degradation: PWY-5695
- 4 reactions found over 4 reactions in the full pathway
- PWY-6538, caffeine degradation III (bacteria, via demethylation): PWY-6538
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: