Difference between revisions of "RXN-17897"

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(Created page with "Category:Gene == Gene Tiso_gene_12835 == * left end position: ** 89 * transcription direction: ** NEGATIVE * right end position: ** 2273 * centisome position: ** 1.3281599...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17897 RXN-17897] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin--nadp_root_isozy...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_12835 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17897 RXN-17897] ==
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* left end position:
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* direction:
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** 89
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** ferredoxin--nadp_root_isozyme_chloroplastic
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* right end position:
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** ferredoxin--nadp_embryochloroplastic
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** 2273
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.18.1.2 EC-1.18.1.2]
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** 1.3281599   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[CARBOXYMETHYLENEBUTENOLIDASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[NADPH]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''=>''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[NADP]][c]
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***automated-name-match
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* With common name(s):
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* [[RXN-9868]]
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** 1 NADPH[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''=>''' 1 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 NADP+[c]
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** in-silico_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6087]]
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* Gene: [[Tiso_gene_20054]]
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* [[PWY-6193]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6089]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17381]]
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_20168]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_19031]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_20055]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_17170]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=89}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=ferredoxin--nadp_root_isozyme_chloroplastic}}
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{{#set: right end position=2273}}
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{{#set: common name=ferredoxin--nadp_embryochloroplastic}}
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{{#set: centisome position=1.3281599    }}
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{{#set: ec number=EC-1.18.1.2}}
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{{#set: reaction associated=CARBOXYMETHYLENEBUTENOLIDASE-RXN|RXN-9868}}
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{{#set: gene associated=Tiso_gene_20054|Tiso_gene_17381|Tiso_gene_20168|Tiso_gene_19031|Tiso_gene_20055|Tiso_gene_17170}}
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{{#set: pathway associated=PWY-6087|PWY-6193|PWY-6089}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:17, 21 March 2018

Reaction RXN-17897

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin--nadp_root_isozyme_chloroplastic
    • ferredoxin--nadp_embryochloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17897&oldid=47560"