Difference between revisions of "Tiso gene 14791"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14014 RXN-14014] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_14791 == * right end position: ** 2967 * transcription direction: ** POSITIVE * left end position: ** 114 * centisome position: ** 2.102157...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14014 RXN-14014] ==
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== Gene Tiso_gene_14791 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2967
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.17.1.8 EC-1.17.1.8]
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** POSITIVE
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* left end position:
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** 114
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* centisome position:
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** 2.1021576   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROLINE--TRNA-LIGASE-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADPH[c] '''+''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c] '''=>''' 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13314]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[manual]]
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* [[TRNA-CHARGING-PWY]]
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** Source: [[manual-primary_network]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2967}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04199 R04199]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04198 R04198]
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{{#set: left end position=114}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=2.1021576    }}
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{{#set: ec number=EC-1.17.1.8}}
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{{#set: reaction associated=PROLINE--TRNA-LIGASE-RXN}}
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{{#set: gene associated=Tiso_gene_13314}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: reconstruction category=orthology|manual}}
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{{#set: reconstruction source=manual-primary_network|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:17, 21 March 2018

Gene Tiso_gene_14791

  • right end position:
    • 2967
  • transcription direction:
    • POSITIVE
  • left end position:
    • 114
  • centisome position:
    • 2.1021576
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14791&oldid=47562"