Difference between revisions of "PGLYCDEHYDROG-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_6058 == * left end position: ** 291 * transcription direction: ** POSITIVE * right end position: ** 2398 * centisome position: ** 2.3073263...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** d-3-phosphogly...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6058 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] ==
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* left end position:
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* direction:
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** 291
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** d-3-phosphoglycerate_dehydrogenase
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* right end position:
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** ORF
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** 2398
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.95 EC-1.1.1.95]
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** 2.3073263   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.4.11.5-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[G3P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[NADH]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 3-phospho-D-glycerate[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6223]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6224]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17123]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_15687]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_15686]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_18904]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=291}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
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{{#set: right end position=2398}}
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* LIGAND-RXN:
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{{#set: centisome position=2.3073263    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
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{{#set: reaction associated=3.4.11.5-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q58424 Q58424]
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** [http://www.uniprot.org/uniprot/P43885 P43885]
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** [http://www.uniprot.org/uniprot/P35136 P35136]
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** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
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** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
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** [http://www.uniprot.org/uniprot/P40510 P40510]
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** [http://www.uniprot.org/uniprot/P40054 P40054]
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** [http://www.uniprot.org/uniprot/O49485 O49485]
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** [http://www.uniprot.org/uniprot/P87228 P87228]
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** [http://www.uniprot.org/uniprot/O04130 O04130]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=d-3-phosphoglycerate_dehydrogenase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.1.1.95}}
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{{#set: gene associated=Tiso_gene_6223|Tiso_gene_6224|Tiso_gene_17123|Tiso_gene_15687|Tiso_gene_15686|Tiso_gene_18904}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:18, 21 March 2018

Reaction PGLYCDEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • d-3-phosphoglycerate_dehydrogenase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-phospho-D-glycerate[c] + 1 NAD+[c] <=> 1 H+[c] + 1 3-phospho-hydroxypyruvate[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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